RNA–Protein interactions for RNA: ENST00000548187.1

CCER1-202, Transcript of coiled-coil glutamate rich protein 1, humanhuman

TSL 3

Gene CCER1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1-202ENST00000548187 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
CCER1-202ENST00000548187 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
CCER1-202ENST00000548187 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
CCER1-202ENST00000548187 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
CCER1-202ENST00000548187 FOXD1Q16676 465 aa15.19■□□□□ 0.02
CCER1-202ENST00000548187 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
CCER1-202ENST00000548187 ADRA2BP18089 450 aa14.39□□□□□ -0.11
CCER1-202ENST00000548187 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
CCER1-202ENST00000548187 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
CCER1-202ENST00000548187 MSH5O43196 834 aa14.16□□□□□ -0.14
CCER1-202ENST00000548187 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
CCER1-202ENST00000548187 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
CCER1-202ENST00000548187 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
CCER1-202ENST00000548187 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
CCER1-202ENST00000548187 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
CCER1-202ENST00000548187 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
CCER1-202ENST00000548187 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
CCER1-202ENST00000548187 KCNA4P22459 653 aa12.67□□□□□ -0.38
CCER1-202ENST00000548187 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
CCER1-202ENST00000548187 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
CCER1-202ENST00000548187 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
CCER1-202ENST00000548187 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
CCER1-202ENST00000548187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCER1-202ENST00000548187 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
CCER1-202ENST00000548187 SLC4A1APQ9BWU0 796 aaKnown RBP12.08□□□□□ -0.48
CCER1-202ENST00000548187 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
CCER1-202ENST00000548187 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
CCER1-202ENST00000548187 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
CCER1-202ENST00000548187 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
CCER1-202ENST00000548187 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
CCER1-202ENST00000548187 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
CCER1-202ENST00000548187 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
CCER1-202ENST00000548187 ZBTB22O15209 634 aa11.65□□□□□ -0.54
CCER1-202ENST00000548187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
CCER1-202ENST00000548187 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
CCER1-202ENST00000548187 CAPN15O75808 1086 aa11.61□□□□□ -0.55
CCER1-202ENST00000548187 APLP2Q06481 763 aa11.59□□□□□ -0.55
CCER1-202ENST00000548187 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
CCER1-202ENST00000548187 MYCNP04198 464 aaPredicted RBP11.57□□□□□ -0.56
CCER1-202ENST00000548187 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
CCER1-202ENST00000548187 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
CCER1-202ENST00000548187 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
CCER1-202ENST00000548187 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
CCER1-202ENST00000548187 DSG3P32926 999 aa11.39□□□□□ -0.59
CCER1-202ENST00000548187 ABCB7O75027 752 aa11.34□□□□□ -0.59
CCER1-202ENST00000548187 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
CCER1-202ENST00000548187 POLA2Q14181 598 aa11.19□□□□□ -0.62
CCER1-202ENST00000548187 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
CCER1-202ENST00000548187 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
CCER1-202ENST00000548187 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
CCER1-202ENST00000548187 FBLN2P98095 1184 aa10.88□□□□□ -0.67
CCER1-202ENST00000548187 OSCARQ8IYS5 282 aa10.82□□□□□ -0.68
CCER1-202ENST00000548187 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
CCER1-202ENST00000548187 AKT1S1Q96B36 256 aa10.7□□□□□ -0.7
CCER1-202ENST00000548187 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
CCER1-202ENST00000548187 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
CCER1-202ENST00000548187 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
CCER1-202ENST00000548187 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
CCER1-202ENST00000548187 FKBP8Q14318 412 aa10.59□□□□□ -0.71
CCER1-202ENST00000548187 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
CCER1-202ENST00000548187 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
CCER1-202ENST00000548187 POTEHQ6S545 545 aa10.54□□□□□ -0.72
CCER1-202ENST00000548187 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
CCER1-202ENST00000548187 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
CCER1-202ENST00000548187 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
CCER1-202ENST00000548187 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCER1-202ENST00000548187 SPDYE1Q8NFV5 336 aaPredicted RBP10.44□□□□□ -0.74
CCER1-202ENST00000548187 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
CCER1-202ENST00000548187 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
CCER1-202ENST00000548187 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCER1-202ENST00000548187 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
CCER1-202ENST00000548187 PROM2Q8N271 834 aa10.26□□□□□ -0.77
CCER1-202ENST00000548187 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
CCER1-202ENST00000548187 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
CCER1-202ENST00000548187 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
CCER1-202ENST00000548187 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
CCER1-202ENST00000548187 HAX1O00165 279 aa10.15□□□□□ -0.78
CCER1-202ENST00000548187 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
CCER1-202ENST00000548187 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
CCER1-202ENST00000548187 VASPP50552 380 aaPredicted RBP10.01□□□□□ -0.81
CCER1-202ENST00000548187 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
CCER1-202ENST00000548187 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
CCER1-202ENST00000548187 PLEKHG5O94827 1062 aa9.96□□□□□ -0.82
CCER1-202ENST00000548187 EVX2Q03828 476 aa9.95□□□□□ -0.82
CCER1-202ENST00000548187 MIER1Q8N108 512 aa9.94□□□□□ -0.82
CCER1-202ENST00000548187 NPM1P06748 294 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCER1-202ENST00000548187 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
CCER1-202ENST00000548187 AMER1Q5JTC6 1135 aaPredicted RBP9.93□□□□□ -0.82
CCER1-202ENST00000548187 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
CCER1-202ENST00000548187 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
CCER1-202ENST00000548187 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
CCER1-202ENST00000548187 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
CCER1-202ENST00000548187 ZRANB1Q9UGI0 708 aa9.85□□□□□ -0.83
CCER1-202ENST00000548187 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
CCER1-202ENST00000548187 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
CCER1-202ENST00000548187 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
CCER1-202ENST00000548187 GABBR2O75899 941 aa9.78□□□□□ -0.84
CCER1-202ENST00000548187 TSPYL2Q9H2G4 693 aaPredicted RBP9.76□□□□□ -0.85
CCER1-202ENST00000548187 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
CCER1-202ENST00000548187 SPOCK2Q92563 424 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms