RNA–Protein interactions for RNA: ENST00000548069.5

FGD6-204, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 3

Gene FGD6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-204ENST00000548069 AEBP2Q6ZN18 517 aaPredicted RBP32.19■■■□□ 2.74
FGD6-204ENST00000548069 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
FGD6-204ENST00000548069 SENP3Q9H4L4 574 aaPredicted RBP27.33■■□□□ 1.97
FGD6-204ENST00000548069 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
FGD6-204ENST00000548069 FOXD1Q16676 465 aa25.47■■□□□ 1.67
FGD6-204ENST00000548069 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
FGD6-204ENST00000548069 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
FGD6-204ENST00000548069 ADRA2BP18089 450 aa24.15■■□□□ 1.46
FGD6-204ENST00000548069 PIAS4Q8N2W9 510 aaPredicted RBP23.91■■□□□ 1.42
FGD6-204ENST00000548069 MSH5O43196 834 aa23.6■■□□□ 1.37
FGD6-204ENST00000548069 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
FGD6-204ENST00000548069 MAPK8IP2Q13387 824 aaPredicted RBP22.07■■□□□ 1.12
FGD6-204ENST00000548069 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
FGD6-204ENST00000548069 PPP4R3CPQ6ZMV5 832 aa21.95■■□□□ 1.1
FGD6-204ENST00000548069 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
FGD6-204ENST00000548069 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
FGD6-204ENST00000548069 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
FGD6-204ENST00000548069 HOXD11P31277 338 aaPredicted RBP21.11■□□□□ 0.97
FGD6-204ENST00000548069 RNF216Q9NWF9 866 aaPredicted RBP21.07■□□□□ 0.96
FGD6-204ENST00000548069 KCNA4P22459 653 aa20.95■□□□□ 0.94
FGD6-204ENST00000548069 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
FGD6-204ENST00000548069 NPM3O75607 178 aaKnown RBP20.93■□□□□ 0.94
FGD6-204ENST00000548069 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
FGD6-204ENST00000548069 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
FGD6-204ENST00000548069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.82
FGD6-204ENST00000548069 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
FGD6-204ENST00000548069 C1QBPQ07021 282 aaKnown RBP19.91■□□□□ 0.78
FGD6-204ENST00000548069 SLC4A2P04920 1241 aa19.87■□□□□ 0.77
FGD6-204ENST00000548069 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
FGD6-204ENST00000548069 U3KPZ7 1027 aaPredicted RBP19.78■□□□□ 0.76
FGD6-204ENST00000548069 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
FGD6-204ENST00000548069 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
FGD6-204ENST00000548069 CAPN15O75808 1086 aa19.35■□□□□ 0.69
FGD6-204ENST00000548069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
FGD6-204ENST00000548069 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
FGD6-204ENST00000548069 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
FGD6-204ENST00000548069 ZBTB22O15209 634 aa19.26■□□□□ 0.67
FGD6-204ENST00000548069 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
FGD6-204ENST00000548069 APLP2Q06481 763 aa19.22■□□□□ 0.67
FGD6-204ENST00000548069 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
FGD6-204ENST00000548069 DSG3P32926 999 aa19.09■□□□□ 0.65
FGD6-204ENST00000548069 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
FGD6-204ENST00000548069 ABCB7O75027 752 aa18.96■□□□□ 0.63
FGD6-204ENST00000548069 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
FGD6-204ENST00000548069 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
FGD6-204ENST00000548069 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
FGD6-204ENST00000548069 POLA2Q14181 598 aa18.73■□□□□ 0.59
FGD6-204ENST00000548069 ATXN8OSP0DMR3 200 aa18.68■□□□□ 0.58
FGD6-204ENST00000548069 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
FGD6-204ENST00000548069 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
FGD6-204ENST00000548069 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
FGD6-204ENST00000548069 FBLN2P98095 1184 aa18.09■□□□□ 0.49
FGD6-204ENST00000548069 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
FGD6-204ENST00000548069 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
FGD6-204ENST00000548069 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
FGD6-204ENST00000548069 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
FGD6-204ENST00000548069 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
FGD6-204ENST00000548069 REM2Q8IYK8 340 aaPredicted RBP17.72■□□□□ 0.43
FGD6-204ENST00000548069 ZNF692Q9BU19 519 aaPredicted RBP17.72■□□□□ 0.43
FGD6-204ENST00000548069 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
FGD6-204ENST00000548069 SSUH2Q9Y2M2 353 aa17.6■□□□□ 0.41
FGD6-204ENST00000548069 POTEHQ6S545 545 aa17.59■□□□□ 0.41
FGD6-204ENST00000548069 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
FGD6-204ENST00000548069 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
FGD6-204ENST00000548069 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
FGD6-204ENST00000548069 SPDYE4A6NLX3 237 aa17.41■□□□□ 0.38
FGD6-204ENST00000548069 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
FGD6-204ENST00000548069 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
FGD6-204ENST00000548069 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
FGD6-204ENST00000548069 PRR29P0C7W0 189 aa17.16■□□□□ 0.34
FGD6-204ENST00000548069 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
FGD6-204ENST00000548069 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
FGD6-204ENST00000548069 FKBP8Q14318 412 aa17.03■□□□□ 0.32
FGD6-204ENST00000548069 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
FGD6-204ENST00000548069 PROM2Q8N271 834 aa16.98■□□□□ 0.31
FGD6-204ENST00000548069 HAX1O00165 279 aa16.92■□□□□ 0.3
FGD6-204ENST00000548069 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
FGD6-204ENST00000548069 FARP1Q9Y4F1 1045 aaPredicted RBP16.78■□□□□ 0.28
FGD6-204ENST00000548069 EVX2Q03828 476 aa16.75■□□□□ 0.27
FGD6-204ENST00000548069 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
FGD6-204ENST00000548069 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
FGD6-204ENST00000548069 MIER1Q8N108 512 aa16.59■□□□□ 0.25
FGD6-204ENST00000548069 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
FGD6-204ENST00000548069 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
FGD6-204ENST00000548069 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
FGD6-204ENST00000548069 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
FGD6-204ENST00000548069 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
FGD6-204ENST00000548069 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
FGD6-204ENST00000548069 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
FGD6-204ENST00000548069 GABBR2O75899 941 aa16.37■□□□□ 0.21
FGD6-204ENST00000548069 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
FGD6-204ENST00000548069 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
FGD6-204ENST00000548069 VASPP50552 380 aaPredicted RBP16.29■□□□□ 0.2
FGD6-204ENST00000548069 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
FGD6-204ENST00000548069 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
FGD6-204ENST00000548069 PHF12Q96QT6 1004 aa16.24■□□□□ 0.19
FGD6-204ENST00000548069 RASEFQ8IZ41 740 aa16.22■□□□□ 0.19
FGD6-204ENST00000548069 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
FGD6-204ENST00000548069 NUBP1P53384 320 aa16.17■□□□□ 0.18
FGD6-204ENST00000548069 CLCN6P51797 869 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms