RNA–Protein interactions for RNA: ENST00000548005.5

CNTN1-205, Transcript of contactin 1, humanhuman

TSL 4

Gene CNTN1, Length 553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-205ENST00000548005 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
CNTN1-205ENST00000548005 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
CNTN1-205ENST00000548005 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
CNTN1-205ENST00000548005 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
CNTN1-205ENST00000548005 FOXD1Q16676 465 aa16.59■□□□□ 0.25
CNTN1-205ENST00000548005 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
CNTN1-205ENST00000548005 MSH5O43196 834 aa15.64■□□□□ 0.09
CNTN1-205ENST00000548005 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
CNTN1-205ENST00000548005 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
CNTN1-205ENST00000548005 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
CNTN1-205ENST00000548005 ADRA2BP18089 450 aa15.22■□□□□ 0.03
CNTN1-205ENST00000548005 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
CNTN1-205ENST00000548005 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
CNTN1-205ENST00000548005 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
CNTN1-205ENST00000548005 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
CNTN1-205ENST00000548005 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
CNTN1-205ENST00000548005 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
CNTN1-205ENST00000548005 KCNA4P22459 653 aa13.45□□□□□ -0.26
CNTN1-205ENST00000548005 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
CNTN1-205ENST00000548005 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
CNTN1-205ENST00000548005 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
CNTN1-205ENST00000548005 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
CNTN1-205ENST00000548005 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
CNTN1-205ENST00000548005 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
CNTN1-205ENST00000548005 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
CNTN1-205ENST00000548005 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
CNTN1-205ENST00000548005 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
CNTN1-205ENST00000548005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNTN1-205ENST00000548005 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
CNTN1-205ENST00000548005 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
CNTN1-205ENST00000548005 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
CNTN1-205ENST00000548005 DSG3P32926 999 aa12.38□□□□□ -0.43
CNTN1-205ENST00000548005 POTEHQ6S545 545 aa12.38□□□□□ -0.43
CNTN1-205ENST00000548005 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
CNTN1-205ENST00000548005 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
CNTN1-205ENST00000548005 ZBTB22O15209 634 aa12.34□□□□□ -0.43
CNTN1-205ENST00000548005 CAPN15O75808 1086 aa12.33□□□□□ -0.44
CNTN1-205ENST00000548005 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
CNTN1-205ENST00000548005 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
CNTN1-205ENST00000548005 APLP2Q06481 763 aa12.11□□□□□ -0.47
CNTN1-205ENST00000548005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
CNTN1-205ENST00000548005 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
CNTN1-205ENST00000548005 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
CNTN1-205ENST00000548005 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
CNTN1-205ENST00000548005 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
CNTN1-205ENST00000548005 ABCB7O75027 752 aa12.01□□□□□ -0.49
CNTN1-205ENST00000548005 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
CNTN1-205ENST00000548005 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
CNTN1-205ENST00000548005 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
CNTN1-205ENST00000548005 POLA2Q14181 598 aa11.71□□□□□ -0.53
CNTN1-205ENST00000548005 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
CNTN1-205ENST00000548005 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
CNTN1-205ENST00000548005 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
CNTN1-205ENST00000548005 FBLN2P98095 1184 aa11.4□□□□□ -0.58
CNTN1-205ENST00000548005 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
CNTN1-205ENST00000548005 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
CNTN1-205ENST00000548005 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
CNTN1-205ENST00000548005 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
CNTN1-205ENST00000548005 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
CNTN1-205ENST00000548005 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
CNTN1-205ENST00000548005 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
CNTN1-205ENST00000548005 FKBP8Q14318 412 aa11.22□□□□□ -0.61
CNTN1-205ENST00000548005 HAX1O00165 279 aa11.14□□□□□ -0.63
CNTN1-205ENST00000548005 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
CNTN1-205ENST00000548005 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
CNTN1-205ENST00000548005 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
CNTN1-205ENST00000548005 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
CNTN1-205ENST00000548005 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
CNTN1-205ENST00000548005 EVX2Q03828 476 aa11.03□□□□□ -0.64
CNTN1-205ENST00000548005 SPDYE1Q8NFV5 336 aaPredicted RBP10.97□□□□□ -0.65
CNTN1-205ENST00000548005 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
CNTN1-205ENST00000548005 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
CNTN1-205ENST00000548005 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
CNTN1-205ENST00000548005 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
CNTN1-205ENST00000548005 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
CNTN1-205ENST00000548005 PROM2Q8N271 834 aa10.85□□□□□ -0.67
CNTN1-205ENST00000548005 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
CNTN1-205ENST00000548005 GABBR2O75899 941 aa10.76□□□□□ -0.69
CNTN1-205ENST00000548005 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
CNTN1-205ENST00000548005 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
CNTN1-205ENST00000548005 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
CNTN1-205ENST00000548005 LHX8Q68G74 356 aa10.68□□□□□ -0.7
CNTN1-205ENST00000548005 VASPP50552 380 aaPredicted RBP10.63□□□□□ -0.71
CNTN1-205ENST00000548005 MIER1Q8N108 512 aa10.59□□□□□ -0.71
CNTN1-205ENST00000548005 PLCD3Q8N3E9 789 aa10.59□□□□□ -0.71
CNTN1-205ENST00000548005 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
CNTN1-205ENST00000548005 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
CNTN1-205ENST00000548005 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
CNTN1-205ENST00000548005 CLCN6P51797 869 aa10.56□□□□□ -0.72
CNTN1-205ENST00000548005 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
CNTN1-205ENST00000548005 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
CNTN1-205ENST00000548005 IFNLR1Q8IU57 520 aaPredicted RBP10.46□□□□□ -0.73
CNTN1-205ENST00000548005 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
CNTN1-205ENST00000548005 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
CNTN1-205ENST00000548005 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
CNTN1-205ENST00000548005 PLSCR2Q9NRY7 297 aa10.4□□□□□ -0.74
CNTN1-205ENST00000548005 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
CNTN1-205ENST00000548005 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
CNTN1-205ENST00000548005 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
CNTN1-205ENST00000548005 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms