RNA–Protein interactions for RNA: ENST00000547996.1

RMST-204, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 3

Gene RMST, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-204ENST00000547996 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
RMST-204ENST00000547996 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
RMST-204ENST00000547996 PHF23Q9BUL5 403 aaPredicted RBP25.99■■□□□ 1.75
RMST-204ENST00000547996 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
RMST-204ENST00000547996 FOXD1Q16676 465 aa24.22■■□□□ 1.47
RMST-204ENST00000547996 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
RMST-204ENST00000547996 POTEDQ86YR6 584 aa23.64■■□□□ 1.37
RMST-204ENST00000547996 MSH5O43196 834 aa22.85■■□□□ 1.25
RMST-204ENST00000547996 ADRA2BP18089 450 aa22.71■■□□□ 1.23
RMST-204ENST00000547996 PPP6R1Q9UPN7 881 aa22.69■■□□□ 1.22
RMST-204ENST00000547996 PIAS4Q8N2W9 510 aaPredicted RBP22.4■■□□□ 1.18
RMST-204ENST00000547996 KCNA4P22459 653 aa21.79■■□□□ 1.08
RMST-204ENST00000547996 PPP4R3CPQ6ZMV5 832 aa21.42■■□□□ 1.02
RMST-204ENST00000547996 EHMT2Q96KQ7 1210 aa21.11■□□□□ 0.97
RMST-204ENST00000547996 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
RMST-204ENST00000547996 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
RMST-204ENST00000547996 NPM3O75607 178 aaKnown RBP20.78■□□□□ 0.92
RMST-204ENST00000547996 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
RMST-204ENST00000547996 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
RMST-204ENST00000547996 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
RMST-204ENST00000547996 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
RMST-204ENST00000547996 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
RMST-204ENST00000547996 ZBTB22O15209 634 aa20.11■□□□□ 0.81
RMST-204ENST00000547996 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
RMST-204ENST00000547996 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
RMST-204ENST00000547996 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
RMST-204ENST00000547996 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
RMST-204ENST00000547996 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
RMST-204ENST00000547996 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
RMST-204ENST00000547996 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
RMST-204ENST00000547996 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
RMST-204ENST00000547996 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
RMST-204ENST00000547996 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
RMST-204ENST00000547996 ATXN8OSP0DMR3 200 aa19.01■□□□□ 0.63
RMST-204ENST00000547996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
RMST-204ENST00000547996 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
RMST-204ENST00000547996 ATF5Q9Y2D1 282 aaPredicted RBP18.66■□□□□ 0.58
RMST-204ENST00000547996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
RMST-204ENST00000547996 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
RMST-204ENST00000547996 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
RMST-204ENST00000547996 FKBP8Q14318 412 aa18.5■□□□□ 0.55
RMST-204ENST00000547996 POTEHQ6S545 545 aa18.36■□□□□ 0.53
RMST-204ENST00000547996 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
RMST-204ENST00000547996 APLP2Q06481 763 aa18.18■□□□□ 0.5
RMST-204ENST00000547996 RTN4Q9NQC3 1192 aaKnown RBP18.16■□□□□ 0.5
RMST-204ENST00000547996 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
RMST-204ENST00000547996 DSG3P32926 999 aa18.01■□□□□ 0.47
RMST-204ENST00000547996 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
RMST-204ENST00000547996 CAPN15O75808 1086 aa17.9■□□□□ 0.46
RMST-204ENST00000547996 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
RMST-204ENST00000547996 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
RMST-204ENST00000547996 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.44
RMST-204ENST00000547996 POLA2Q14181 598 aa17.75■□□□□ 0.43
RMST-204ENST00000547996 FBLN2P98095 1184 aa17.71■□□□□ 0.43
RMST-204ENST00000547996 PROM2Q8N271 834 aa17.62■□□□□ 0.41
RMST-204ENST00000547996 ABCB7O75027 752 aa17.56■□□□□ 0.4
RMST-204ENST00000547996 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
RMST-204ENST00000547996 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
RMST-204ENST00000547996 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
RMST-204ENST00000547996 VASPP50552 380 aaPredicted RBP17.38■□□□□ 0.37
RMST-204ENST00000547996 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
RMST-204ENST00000547996 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
RMST-204ENST00000547996 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
RMST-204ENST00000547996 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
RMST-204ENST00000547996 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
RMST-204ENST00000547996 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
RMST-204ENST00000547996 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
RMST-204ENST00000547996 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
RMST-204ENST00000547996 SSUH2Q9Y2M2 353 aa17.08■□□□□ 0.32
RMST-204ENST00000547996 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
RMST-204ENST00000547996 PKD2Q13563 968 aa16.93■□□□□ 0.3
RMST-204ENST00000547996 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
RMST-204ENST00000547996 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
RMST-204ENST00000547996 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
RMST-204ENST00000547996 SPOCK2Q92563 424 aa16.85■□□□□ 0.29
RMST-204ENST00000547996 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
RMST-204ENST00000547996 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
RMST-204ENST00000547996 PLCB2Q00722 1185 aa16.74■□□□□ 0.27
RMST-204ENST00000547996 MIER1Q8N108 512 aa16.72■□□□□ 0.27
RMST-204ENST00000547996 ECM2O94769 699 aaPredicted RBP16.65■□□□□ 0.26
RMST-204ENST00000547996 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
RMST-204ENST00000547996 PIP4P2Q8N4L2 257 aa16.55■□□□□ 0.24
RMST-204ENST00000547996 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
RMST-204ENST00000547996 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
RMST-204ENST00000547996 RGL2O15211 777 aa16.51■□□□□ 0.23
RMST-204ENST00000547996 HAP1P54257 671 aaPredicted RBP16.49■□□□□ 0.23
RMST-204ENST00000547996 REM2Q8IYK8 340 aaPredicted RBP16.48■□□□□ 0.23
RMST-204ENST00000547996 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
RMST-204ENST00000547996 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
RMST-204ENST00000547996 HAX1O00165 279 aa16.42■□□□□ 0.22
RMST-204ENST00000547996 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
RMST-204ENST00000547996 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
RMST-204ENST00000547996 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
RMST-204ENST00000547996 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
RMST-204ENST00000547996 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
RMST-204ENST00000547996 NUBP1P53384 320 aa16.3■□□□□ 0.2
RMST-204ENST00000547996 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
RMST-204ENST00000547996 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
RMST-204ENST00000547996 EVX2Q03828 476 aa16.27■□□□□ 0.2
RMST-204ENST00000547996 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms