RNA–Protein interactions for RNA: ENST00000547961.1

TWF1-206, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 2

Gene TWF1, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-206ENST00000547961 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
TWF1-206ENST00000547961 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
TWF1-206ENST00000547961 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
TWF1-206ENST00000547961 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
TWF1-206ENST00000547961 FOXD1Q16676 465 aa19.47■□□□□ 0.71
TWF1-206ENST00000547961 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
TWF1-206ENST00000547961 MSH5O43196 834 aa18.31■□□□□ 0.52
TWF1-206ENST00000547961 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
TWF1-206ENST00000547961 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
TWF1-206ENST00000547961 POTEDQ86YR6 584 aa18.07■□□□□ 0.48
TWF1-206ENST00000547961 ADRA2BP18089 450 aa18.04■□□□□ 0.48
TWF1-206ENST00000547961 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
TWF1-206ENST00000547961 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
TWF1-206ENST00000547961 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
TWF1-206ENST00000547961 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
TWF1-206ENST00000547961 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
TWF1-206ENST00000547961 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
TWF1-206ENST00000547961 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
TWF1-206ENST00000547961 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
TWF1-206ENST00000547961 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
TWF1-206ENST00000547961 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
TWF1-206ENST00000547961 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
TWF1-206ENST00000547961 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
TWF1-206ENST00000547961 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
TWF1-206ENST00000547961 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
TWF1-206ENST00000547961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
TWF1-206ENST00000547961 KCNA4P22459 653 aa14.81□□□□□ -0.04
TWF1-206ENST00000547961 U3KPZ7 1027 aaPredicted RBP14.79□□□□□ -0.04
TWF1-206ENST00000547961 CAPN15O75808 1086 aa14.62□□□□□ -0.07
TWF1-206ENST00000547961 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
TWF1-206ENST00000547961 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
TWF1-206ENST00000547961 DSG3P32926 999 aa14.56□□□□□ -0.08
TWF1-206ENST00000547961 APLP2Q06481 763 aa14.41□□□□□ -0.1
TWF1-206ENST00000547961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
TWF1-206ENST00000547961 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
TWF1-206ENST00000547961 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
TWF1-206ENST00000547961 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
TWF1-206ENST00000547961 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
TWF1-206ENST00000547961 ABCB7O75027 752 aa14.25□□□□□ -0.13
TWF1-206ENST00000547961 POTEHQ6S545 545 aa14.15□□□□□ -0.14
TWF1-206ENST00000547961 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
TWF1-206ENST00000547961 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
TWF1-206ENST00000547961 POLA2Q14181 598 aa13.94□□□□□ -0.18
TWF1-206ENST00000547961 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
TWF1-206ENST00000547961 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
TWF1-206ENST00000547961 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
TWF1-206ENST00000547961 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
TWF1-206ENST00000547961 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
TWF1-206ENST00000547961 ZBTB22O15209 634 aa13.6□□□□□ -0.23
TWF1-206ENST00000547961 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
TWF1-206ENST00000547961 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
TWF1-206ENST00000547961 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
TWF1-206ENST00000547961 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
TWF1-206ENST00000547961 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
TWF1-206ENST00000547961 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
TWF1-206ENST00000547961 FBLN2P98095 1184 aa13.27□□□□□ -0.29
TWF1-206ENST00000547961 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
TWF1-206ENST00000547961 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
TWF1-206ENST00000547961 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
TWF1-206ENST00000547961 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
TWF1-206ENST00000547961 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
TWF1-206ENST00000547961 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
TWF1-206ENST00000547961 HAX1O00165 279 aa13.1□□□□□ -0.31
TWF1-206ENST00000547961 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
TWF1-206ENST00000547961 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
TWF1-206ENST00000547961 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
TWF1-206ENST00000547961 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
TWF1-206ENST00000547961 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
TWF1-206ENST00000547961 EVX2Q03828 476 aa12.9□□□□□ -0.34
TWF1-206ENST00000547961 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
TWF1-206ENST00000547961 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
TWF1-206ENST00000547961 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
TWF1-206ENST00000547961 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
TWF1-206ENST00000547961 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
TWF1-206ENST00000547961 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
TWF1-206ENST00000547961 GABBR2O75899 941 aa12.62□□□□□ -0.39
TWF1-206ENST00000547961 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
TWF1-206ENST00000547961 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
TWF1-206ENST00000547961 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
TWF1-206ENST00000547961 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
TWF1-206ENST00000547961 CLCN6P51797 869 aa12.41□□□□□ -0.42
TWF1-206ENST00000547961 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
TWF1-206ENST00000547961 LHX8Q68G74 356 aa12.38□□□□□ -0.43
TWF1-206ENST00000547961 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
TWF1-206ENST00000547961 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
TWF1-206ENST00000547961 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
TWF1-206ENST00000547961 DCBLD2Q96PD2 775 aa12.28□□□□□ -0.44
TWF1-206ENST00000547961 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
TWF1-206ENST00000547961 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
TWF1-206ENST00000547961 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
TWF1-206ENST00000547961 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
TWF1-206ENST00000547961 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
TWF1-206ENST00000547961 PROM2Q8N271 834 aa12.12□□□□□ -0.47
TWF1-206ENST00000547961 MS4A3Q96HJ5 214 aa11.97□□□□□ -0.49
TWF1-206ENST00000547961 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
TWF1-206ENST00000547961 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
TWF1-206ENST00000547961 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
TWF1-206ENST00000547961 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
TWF1-206ENST00000547961 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
TWF1-206ENST00000547961 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms