RNA–Protein interactions for RNA: ENST00000547869.1

SLC25A3-207, Transcript of solute carrier family 25 member 3, humanhuman

TSL 2

Gene SLC25A3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-207ENST00000547869 AEBP2Q6ZN18 517 aaPredicted RBP40.39■■■■■ 4.06
SLC25A3-207ENST00000547869 CHIC1Q5VXU3 224 aa38.47■■■■□ 3.75
SLC25A3-207ENST00000547869 SENP3Q9H4L4 574 aaPredicted RBP34.47■■■■□ 3.11
SLC25A3-207ENST00000547869 PHF23Q9BUL5 403 aaPredicted RBP34.02■■■■□ 3.04
SLC25A3-207ENST00000547869 FOXD1Q16676 465 aa32.09■■■□□ 2.73
SLC25A3-207ENST00000547869 PLPPR3Q6T4P5 718 aa30.81■■■□□ 2.52
SLC25A3-207ENST00000547869 PPP6R1Q9UPN7 881 aa30.08■■■□□ 2.41
SLC25A3-207ENST00000547869 PIAS4Q8N2W9 510 aaPredicted RBP30.04■■■□□ 2.4
SLC25A3-207ENST00000547869 MSH5O43196 834 aa30.01■■■□□ 2.39
SLC25A3-207ENST00000547869 ADRA2BP18089 450 aa29.99■■■□□ 2.39
SLC25A3-207ENST00000547869 POTEDQ86YR6 584 aa29.09■■■□□ 2.25
SLC25A3-207ENST00000547869 MAPK8IP2Q13387 824 aaPredicted RBP27.5■■□□□ 1.99
SLC25A3-207ENST00000547869 SCAF1Q9H7N4 1312 aaKnown RBP27.46■■□□□ 1.99
SLC25A3-207ENST00000547869 DMRT2Q9Y5R5 561 aa27.34■■□□□ 1.97
SLC25A3-207ENST00000547869 PPP4R3CPQ6ZMV5 832 aa27■■□□□ 1.91
SLC25A3-207ENST00000547869 CNKSR2Q8WXI2 1034 aa26.48■■□□□ 1.83
SLC25A3-207ENST00000547869 HOXD11P31277 338 aaPredicted RBP26.37■■□□□ 1.81
SLC25A3-207ENST00000547869 DCAF8L1A6NGE4 600 aa26.23■■□□□ 1.79
SLC25A3-207ENST00000547869 RNF216Q9NWF9 866 aaPredicted RBP26.21■■□□□ 1.79
SLC25A3-207ENST00000547869 NCBP3Q53F19 620 aaKnown RBP26.02■■□□□ 1.76
SLC25A3-207ENST00000547869 CACNB1Q02641 598 aaPredicted RBP25.68■■□□□ 1.7
SLC25A3-207ENST00000547869 NPM3O75607 178 aaKnown RBP25.63■■□□□ 1.69
SLC25A3-207ENST00000547869 RNF39Q9H2S5 420 aa25.61■■□□□ 1.69
SLC25A3-207ENST00000547869 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.66
SLC25A3-207ENST00000547869 C1QBPQ07021 282 aaKnown RBP25.25■■□□□ 1.63
SLC25A3-207ENST00000547869 KCNA4P22459 653 aa25.24■■□□□ 1.63
SLC25A3-207ENST00000547869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.62
SLC25A3-207ENST00000547869 U3KPZ7 1027 aaPredicted RBP24.62■■□□□ 1.53
SLC25A3-207ENST00000547869 SLC4A2P04920 1241 aa24.44■■□□□ 1.5
SLC25A3-207ENST00000547869 SPINK5Q9NQ38 1064 aaPredicted RBP24.23■■□□□ 1.47
SLC25A3-207ENST00000547869 CAPN15O75808 1086 aa24.19■■□□□ 1.46
SLC25A3-207ENST00000547869 DSG3P32926 999 aa24.02■■□□□ 1.44
SLC25A3-207ENST00000547869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
SLC25A3-207ENST00000547869 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
SLC25A3-207ENST00000547869 APLP2Q06481 763 aa23.97■■□□□ 1.43
SLC25A3-207ENST00000547869 SAMD1Q6SPF0 538 aaPredicted RBP23.85■■□□□ 1.41
SLC25A3-207ENST00000547869 SLC4A1APQ9BWU0 796 aaKnown RBP23.85■■□□□ 1.41
SLC25A3-207ENST00000547869 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
SLC25A3-207ENST00000547869 ZNF219Q9P2Y4 722 aaPredicted RBP23.81■■□□□ 1.4
SLC25A3-207ENST00000547869 MYCNP04198 464 aaPredicted RBP23.72■■□□□ 1.39
SLC25A3-207ENST00000547869 ABCB7O75027 752 aa23.64■■□□□ 1.37
SLC25A3-207ENST00000547869 FOXD4L1Q9NU39 408 aa23.53■■□□□ 1.36
SLC25A3-207ENST00000547869 POLA2Q14181 598 aa23.21■■□□□ 1.31
SLC25A3-207ENST00000547869 ZBTB22O15209 634 aa23.2■■□□□ 1.3
SLC25A3-207ENST00000547869 ATF5Q9Y2D1 282 aaPredicted RBP23.13■■□□□ 1.29
SLC25A3-207ENST00000547869 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
SLC25A3-207ENST00000547869 POTEHQ6S545 545 aa22.83■■□□□ 1.25
SLC25A3-207ENST00000547869 ATXN8OSP0DMR3 200 aa22.78■■□□□ 1.24
SLC25A3-207ENST00000547869 ZBTB12Q9Y330 459 aaPredicted RBP22.78■■□□□ 1.24
SLC25A3-207ENST00000547869 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
SLC25A3-207ENST00000547869 AKT1S1Q96B36 256 aa22.42■■□□□ 1.18
SLC25A3-207ENST00000547869 CHRDL2Q6WN34 429 aa22.38■■□□□ 1.17
SLC25A3-207ENST00000547869 FBLN2P98095 1184 aa22.26■■□□□ 1.15
SLC25A3-207ENST00000547869 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
SLC25A3-207ENST00000547869 REM2Q8IYK8 340 aaPredicted RBP22.2■■□□□ 1.14
SLC25A3-207ENST00000547869 MKRN4PQ13434 485 aaPredicted RBP22.08■■□□□ 1.13
SLC25A3-207ENST00000547869 SPDYE2BA6NHP3 402 aa22.07■■□□□ 1.12
SLC25A3-207ENST00000547869 SPDYE6P0CI01 402 aa22.07■■□□□ 1.12
SLC25A3-207ENST00000547869 SPDYE2Q495Y8 402 aa22.07■■□□□ 1.12
SLC25A3-207ENST00000547869 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
SLC25A3-207ENST00000547869 PITPNM1O00562 1244 aa21.97■■□□□ 1.11
SLC25A3-207ENST00000547869 PIP4P2Q8N4L2 257 aa21.86■■□□□ 1.09
SLC25A3-207ENST00000547869 ZNF692Q9BU19 519 aaPredicted RBP21.82■■□□□ 1.08
SLC25A3-207ENST00000547869 SSUH2Q9Y2M2 353 aa21.78■■□□□ 1.08
SLC25A3-207ENST00000547869 FXR2P51116 673 aaKnown RBP eCLIP21.74■■□□□ 1.071e-14■■■□□ 15.3
SLC25A3-207ENST00000547869 SPDYE1Q8NFV5 336 aaPredicted RBP21.66■■□□□ 1.06
SLC25A3-207ENST00000547869 CLEC11AQ9Y240 323 aa21.62■■□□□ 1.05
SLC25A3-207ENST00000547869 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
SLC25A3-207ENST00000547869 SP7Q8TDD2 431 aaPredicted RBP21.46■■□□□ 1.03
SLC25A3-207ENST00000547869 HAX1O00165 279 aa21.45■■□□□ 1.02
SLC25A3-207ENST00000547869 PRKAR2AP13861 404 aaKnown RBP21.41■■□□□ 1.02
SLC25A3-207ENST00000547869 PRR29P0C7W0 189 aa21.27■■□□□ 1
SLC25A3-207ENST00000547869 CHADLQ6NUI6 762 aa21.18■□□□□ 0.98
SLC25A3-207ENST00000547869 EVX2Q03828 476 aa21.16■□□□□ 0.98
SLC25A3-207ENST00000547869 SPDYE4A6NLX3 237 aa21.11■□□□□ 0.97
SLC25A3-207ENST00000547869 C19orf67A6NJJ6 358 aa21.04■□□□□ 0.96
SLC25A3-207ENST00000547869 STAG3Q9UJ98 1225 aa20.94■□□□□ 0.94
SLC25A3-207ENST00000547869 FARP1Q9Y4F1 1045 aaPredicted RBP20.89■□□□□ 0.93
SLC25A3-207ENST00000547869 CREBZFQ9NS37 354 aa20.76■□□□□ 0.91
SLC25A3-207ENST00000547869 CD44P16070 742 aaKnown RBP20.74■□□□□ 0.91
SLC25A3-207ENST00000547869 GABBR2O75899 941 aa20.71■□□□□ 0.91
SLC25A3-207ENST00000547869 PROM2Q8N271 834 aa20.61■□□□□ 0.89
SLC25A3-207ENST00000547869 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
SLC25A3-207ENST00000547869 CLCN6P51797 869 aa20.43■□□□□ 0.86
SLC25A3-207ENST00000547869 ZNF579Q8NAF0 562 aaKnown RBP20.42■□□□□ 0.86
SLC25A3-207ENST00000547869 MNX1P50219 401 aaPredicted RBP20.41■□□□□ 0.86
SLC25A3-207ENST00000547869 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
SLC25A3-207ENST00000547869 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
SLC25A3-207ENST00000547869 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
SLC25A3-207ENST00000547869 DCBLD2Q96PD2 775 aa20.2■□□□□ 0.82
SLC25A3-207ENST00000547869 FKBP8Q14318 412 aa20.18■□□□□ 0.82
SLC25A3-207ENST00000547869 PHF12Q96QT6 1004 aa20.18■□□□□ 0.82
SLC25A3-207ENST00000547869 GALR2O43603 387 aaPredicted RBP20.17■□□□□ 0.82
SLC25A3-207ENST00000547869 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
SLC25A3-207ENST00000547869 MIER1Q8N108 512 aa20.13■□□□□ 0.81
SLC25A3-207ENST00000547869 LHX8Q68G74 356 aa20.12■□□□□ 0.81
SLC25A3-207ENST00000547869 TSPYL2Q9H2G4 693 aaPredicted RBP20.03■□□□□ 0.8
SLC25A3-207ENST00000547869 PLCD3Q8N3E9 789 aa20■□□□□ 0.79
SLC25A3-207ENST00000547869 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
SLC25A3-207ENST00000547869 MS4A3Q96HJ5 214 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms