RNA–Protein interactions for RNA: ENST00000546912.1

CPM-204, Transcript of carboxypeptidase M, humanhuman

TSL 2

Gene CPM, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-204ENST00000546912 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
CPM-204ENST00000546912 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
CPM-204ENST00000546912 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
CPM-204ENST00000546912 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
CPM-204ENST00000546912 FOXD1Q16676 465 aa21.15■□□□□ 0.98
CPM-204ENST00000546912 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
CPM-204ENST00000546912 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
CPM-204ENST00000546912 ADRA2BP18089 450 aa19.94■□□□□ 0.78
CPM-204ENST00000546912 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
CPM-204ENST00000546912 MSH5O43196 834 aa19.65■□□□□ 0.74
CPM-204ENST00000546912 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
CPM-204ENST00000546912 MAPK8IP2Q13387 824 aaPredicted RBP18.26■□□□□ 0.51
CPM-204ENST00000546912 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
CPM-204ENST00000546912 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
CPM-204ENST00000546912 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
CPM-204ENST00000546912 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
CPM-204ENST00000546912 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
CPM-204ENST00000546912 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
CPM-204ENST00000546912 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
CPM-204ENST00000546912 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
CPM-204ENST00000546912 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
CPM-204ENST00000546912 KCNA4P22459 653 aa17.05■□□□□ 0.32
CPM-204ENST00000546912 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
CPM-204ENST00000546912 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
CPM-204ENST00000546912 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
CPM-204ENST00000546912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
CPM-204ENST00000546912 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
CPM-204ENST00000546912 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
CPM-204ENST00000546912 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
CPM-204ENST00000546912 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
CPM-204ENST00000546912 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
CPM-204ENST00000546912 CAPN15O75808 1086 aa16.01■□□□□ 0.15
CPM-204ENST00000546912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
CPM-204ENST00000546912 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
CPM-204ENST00000546912 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
CPM-204ENST00000546912 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
CPM-204ENST00000546912 DSG3P32926 999 aa15.83■□□□□ 0.12
CPM-204ENST00000546912 APLP2Q06481 763 aa15.82■□□□□ 0.12
CPM-204ENST00000546912 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
CPM-204ENST00000546912 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
CPM-204ENST00000546912 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
CPM-204ENST00000546912 ABCB7O75027 752 aa15.7■□□□□ 0.1
CPM-204ENST00000546912 ZBTB22O15209 634 aa15.69■□□□□ 0.1
CPM-204ENST00000546912 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
CPM-204ENST00000546912 POLA2Q14181 598 aa15.44■□□□□ 0.06
CPM-204ENST00000546912 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
CPM-204ENST00000546912 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
CPM-204ENST00000546912 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
CPM-204ENST00000546912 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
CPM-204ENST00000546912 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
CPM-204ENST00000546912 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CPM-204ENST00000546912 FBLN2P98095 1184 aa14.83□□□□□ -0.04
CPM-204ENST00000546912 POTEHQ6S545 545 aa14.82□□□□□ -0.04
CPM-204ENST00000546912 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
CPM-204ENST00000546912 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
CPM-204ENST00000546912 CHRDL2Q6WN34 429 aa14.68□□□□□ -0.06
CPM-204ENST00000546912 REM2Q8IYK8 340 aaPredicted RBP14.67□□□□□ -0.06
CPM-204ENST00000546912 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
CPM-204ENST00000546912 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
CPM-204ENST00000546912 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
CPM-204ENST00000546912 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
CPM-204ENST00000546912 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
CPM-204ENST00000546912 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
CPM-204ENST00000546912 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
CPM-204ENST00000546912 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
CPM-204ENST00000546912 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
CPM-204ENST00000546912 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
CPM-204ENST00000546912 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPM-204ENST00000546912 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
CPM-204ENST00000546912 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
CPM-204ENST00000546912 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
CPM-204ENST00000546912 HAX1O00165 279 aa14.09□□□□□ -0.15
CPM-204ENST00000546912 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
CPM-204ENST00000546912 SP7Q8TDD2 431 aaPredicted RBP13.98□□□□□ -0.17
CPM-204ENST00000546912 EVX2Q03828 476 aa13.95□□□□□ -0.18
CPM-204ENST00000546912 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
CPM-204ENST00000546912 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
CPM-204ENST00000546912 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
CPM-204ENST00000546912 PROM2Q8N271 834 aa13.83□□□□□ -0.2
CPM-204ENST00000546912 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
CPM-204ENST00000546912 FKBP8Q14318 412 aa13.75□□□□□ -0.21
CPM-204ENST00000546912 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
CPM-204ENST00000546912 GABBR2O75899 941 aa13.62□□□□□ -0.23
CPM-204ENST00000546912 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
CPM-204ENST00000546912 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
CPM-204ENST00000546912 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
CPM-204ENST00000546912 MIER1Q8N108 512 aa13.53□□□□□ -0.24
CPM-204ENST00000546912 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
CPM-204ENST00000546912 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
CPM-204ENST00000546912 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
CPM-204ENST00000546912 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
CPM-204ENST00000546912 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
CPM-204ENST00000546912 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
CPM-204ENST00000546912 CLCN6P51797 869 aa13.37□□□□□ -0.27
CPM-204ENST00000546912 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
CPM-204ENST00000546912 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
CPM-204ENST00000546912 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
CPM-204ENST00000546912 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
CPM-204ENST00000546912 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
CPM-204ENST00000546912 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms