RNA–Protein interactions for RNA: ENST00000546664.2

ACSS3-202, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

TSL 5

Gene ACSS3, Length 379 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-202ENST00000546664 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
ACSS3-202ENST00000546664 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
ACSS3-202ENST00000546664 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
ACSS3-202ENST00000546664 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
ACSS3-202ENST00000546664 PLPPR3Q6T4P5 718 aa11.66□□□□□ -0.54
ACSS3-202ENST00000546664 FOXD1Q16676 465 aa10.95□□□□□ -0.66
ACSS3-202ENST00000546664 ADRA2BP18089 450 aa10.85□□□□□ -0.67
ACSS3-202ENST00000546664 PPP6R1Q9UPN7 881 aa10.85□□□□□ -0.67
ACSS3-202ENST00000546664 KCNA4P22459 653 aa10.5□□□□□ -0.73
ACSS3-202ENST00000546664 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
ACSS3-202ENST00000546664 PPP4R3CPQ6ZMV5 832 aa10.3□□□□□ -0.76
ACSS3-202ENST00000546664 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
ACSS3-202ENST00000546664 NCBP3Q53F19 620 aaKnown RBP10.14□□□□□ -0.79
ACSS3-202ENST00000546664 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
ACSS3-202ENST00000546664 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
ACSS3-202ENST00000546664 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
ACSS3-202ENST00000546664 MSH5O43196 834 aa9.95□□□□□ -0.82
ACSS3-202ENST00000546664 CNKSR2Q8WXI2 1034 aa9.95□□□□□ -0.82
ACSS3-202ENST00000546664 SCAF1Q9H7N4 1312 aaKnown RBP9.94□□□□□ -0.82
ACSS3-202ENST00000546664 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
ACSS3-202ENST00000546664 ZBTB22O15209 634 aa9.69□□□□□ -0.86
ACSS3-202ENST00000546664 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
ACSS3-202ENST00000546664 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
ACSS3-202ENST00000546664 FOXD4L1Q9NU39 408 aa9.58□□□□□ -0.88
ACSS3-202ENST00000546664 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
ACSS3-202ENST00000546664 DMRT2Q9Y5R5 561 aa9.55□□□□□ -0.88
ACSS3-202ENST00000546664 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
ACSS3-202ENST00000546664 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
ACSS3-202ENST00000546664 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
ACSS3-202ENST00000546664 MYCNP04198 464 aaPredicted RBP9.25□□□□□ -0.93
ACSS3-202ENST00000546664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.98□□□□□ -0.97
ACSS3-202ENST00000546664 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
ACSS3-202ENST00000546664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.98□□□□□ -0.97
ACSS3-202ENST00000546664 DCAF8L1A6NGE4 600 aa8.96□□□□□ -0.98
ACSS3-202ENST00000546664 SAMD1Q6SPF0 538 aaPredicted RBP8.96□□□□□ -0.98
ACSS3-202ENST00000546664 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
ACSS3-202ENST00000546664 U3KPZ7 1027 aaPredicted RBP8.94□□□□□ -0.98
ACSS3-202ENST00000546664 FKBP8Q14318 412 aa8.93□□□□□ -0.98
ACSS3-202ENST00000546664 AMER1Q5JTC6 1135 aaPredicted RBP8.91□□□□□ -0.98
ACSS3-202ENST00000546664 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
ACSS3-202ENST00000546664 APLP2Q06481 763 aa8.78□□□□□ -1
ACSS3-202ENST00000546664 ZNF219Q9P2Y4 722 aaPredicted RBP8.75□□□□□ -1.01
ACSS3-202ENST00000546664 MKRN4PQ13434 485 aaPredicted RBP8.6□□□□□ -1.03
ACSS3-202ENST00000546664 PROM2Q8N271 834 aa8.6□□□□□ -1.03
ACSS3-202ENST00000546664 RNF39Q9H2S5 420 aa8.58□□□□□ -1.04
ACSS3-202ENST00000546664 SPDYE4A6NLX3 237 aa8.56□□□□□ -1.04
ACSS3-202ENST00000546664 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
ACSS3-202ENST00000546664 SPINK5Q9NQ38 1064 aaPredicted RBP8.53□□□□□ -1.04
ACSS3-202ENST00000546664 FBLN2P98095 1184 aa8.52□□□□□ -1.05
ACSS3-202ENST00000546664 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
ACSS3-202ENST00000546664 TRHP20396 242 aaPredicted RBP8.49□□□□□ -1.05
ACSS3-202ENST00000546664 POLA2Q14181 598 aa8.49□□□□□ -1.05
ACSS3-202ENST00000546664 CAPN15O75808 1086 aa8.44□□□□□ -1.06
ACSS3-202ENST00000546664 ZBTB12Q9Y330 459 aaPredicted RBP8.43□□□□□ -1.06
ACSS3-202ENST00000546664 VASPP50552 380 aaPredicted RBP8.41□□□□□ -1.06
ACSS3-202ENST00000546664 IFNLR1Q8IU57 520 aaPredicted RBP8.34□□□□□ -1.07
ACSS3-202ENST00000546664 POTEDQ86YR6 584 aa8.33□□□□□ -1.08
ACSS3-202ENST00000546664 ABCB7O75027 752 aa8.31□□□□□ -1.08
ACSS3-202ENST00000546664 DSG3P32926 999 aa8.29□□□□□ -1.08
ACSS3-202ENST00000546664 SSUH2Q9Y2M2 353 aa8.25□□□□□ -1.09
ACSS3-202ENST00000546664 SPDYE2BA6NHP3 402 aa8.24□□□□□ -1.09
ACSS3-202ENST00000546664 SPDYE6P0CI01 402 aa8.24□□□□□ -1.09
ACSS3-202ENST00000546664 SPDYE2Q495Y8 402 aa8.24□□□□□ -1.09
ACSS3-202ENST00000546664 PKD2Q13563 968 aa8.23□□□□□ -1.09
ACSS3-202ENST00000546664 ZNF692Q9BU19 519 aaPredicted RBP8.21□□□□□ -1.1
ACSS3-202ENST00000546664 STAG3Q9UJ98 1225 aa8.21□□□□□ -1.1
ACSS3-202ENST00000546664 PLCB2Q00722 1185 aa8.2□□□□□ -1.1
ACSS3-202ENST00000546664 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
ACSS3-202ENST00000546664 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
ACSS3-202ENST00000546664 SPOCK2Q92563 424 aa8.16□□□□□ -1.1
ACSS3-202ENST00000546664 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
ACSS3-202ENST00000546664 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
ACSS3-202ENST00000546664 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
ACSS3-202ENST00000546664 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
ACSS3-202ENST00000546664 ECM2O94769 699 aaPredicted RBP8.05□□□□□ -1.12
ACSS3-202ENST00000546664 DCAF8L2P0C7V8 631 aa8.04□□□□□ -1.12
ACSS3-202ENST00000546664 MIER1Q8N108 512 aa8.04□□□□□ -1.12
ACSS3-202ENST00000546664 BBXQ8WY36 941 aaPredicted RBP8.03□□□□□ -1.12
ACSS3-202ENST00000546664 ZBTB47Q9UFB7 747 aaPredicted RBP8.02□□□□□ -1.13
ACSS3-202ENST00000546664 HAP1P54257 671 aaPredicted RBP8□□□□□ -1.13
ACSS3-202ENST00000546664 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
ACSS3-202ENST00000546664 RGL2O15211 777 aa7.98□□□□□ -1.13
ACSS3-202ENST00000546664 PLEKHG5O94827 1062 aa7.98□□□□□ -1.13
ACSS3-202ENST00000546664 NPM1P06748 294 aaKnown RBP eCLIP7.98□□□□□ -1.13
ACSS3-202ENST00000546664 TAOK2Q9UL54 1235 aa7.98□□□□□ -1.13
ACSS3-202ENST00000546664 CACNB1Q02641 598 aaPredicted RBP7.97□□□□□ -1.13
ACSS3-202ENST00000546664 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.97□□□□□ -1.13
ACSS3-202ENST00000546664 TRIM41Q8WV44 630 aa7.96□□□□□ -1.14
ACSS3-202ENST00000546664 BCANQ96GW7 911 aa7.94□□□□□ -1.14
ACSS3-202ENST00000546664 ARXQ96QS3 562 aa7.93□□□□□ -1.14
ACSS3-202ENST00000546664 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
ACSS3-202ENST00000546664 CIZ1Q9ULV3 898 aaPredicted RBP7.89□□□□□ -1.15
ACSS3-202ENST00000546664 GSE1Q14687 1217 aa7.88□□□□□ -1.15
ACSS3-202ENST00000546664 PAXIP1Q6ZW49 1069 aaPredicted RBP7.88□□□□□ -1.15
ACSS3-202ENST00000546664 AKT1S1Q96B36 256 aa7.88□□□□□ -1.15
ACSS3-202ENST00000546664 RBM42Q9BTD8 480 aaKnown RBP7.88□□□□□ -1.15
ACSS3-202ENST00000546664 NUBP1P53384 320 aa7.87□□□□□ -1.15
ACSS3-202ENST00000546664 SPDYE1Q8NFV5 336 aaPredicted RBP7.87□□□□□ -1.15
ACSS3-202ENST00000546664 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
ACSS3-202ENST00000546664 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms