RNA–Protein interactions for RNA: ENST00000546606.1

ZFC3H1-203, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 2

Gene ZFC3H1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-203ENST00000546606 AEBP2Q6ZN18 517 aaPredicted RBP26.76■■□□□ 1.87
ZFC3H1-203ENST00000546606 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
ZFC3H1-203ENST00000546606 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
ZFC3H1-203ENST00000546606 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
ZFC3H1-203ENST00000546606 FOXD1Q16676 465 aa21.45■■□□□ 1.02
ZFC3H1-203ENST00000546606 POTEDQ86YR6 584 aa21.11■□□□□ 0.97
ZFC3H1-203ENST00000546606 MSH5O43196 834 aa20.31■□□□□ 0.84
ZFC3H1-203ENST00000546606 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
ZFC3H1-203ENST00000546606 PIAS4Q8N2W9 510 aaPredicted RBP19.81■□□□□ 0.76
ZFC3H1-203ENST00000546606 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
ZFC3H1-203ENST00000546606 ADRA2BP18089 450 aa19.55■□□□□ 0.72
ZFC3H1-203ENST00000546606 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
ZFC3H1-203ENST00000546606 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
ZFC3H1-203ENST00000546606 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
ZFC3H1-203ENST00000546606 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
ZFC3H1-203ENST00000546606 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
ZFC3H1-203ENST00000546606 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
ZFC3H1-203ENST00000546606 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
ZFC3H1-203ENST00000546606 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
ZFC3H1-203ENST00000546606 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
ZFC3H1-203ENST00000546606 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
ZFC3H1-203ENST00000546606 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
ZFC3H1-203ENST00000546606 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
ZFC3H1-203ENST00000546606 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
ZFC3H1-203ENST00000546606 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
ZFC3H1-203ENST00000546606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
ZFC3H1-203ENST00000546606 POTEHQ6S545 545 aa16.38■□□□□ 0.21
ZFC3H1-203ENST00000546606 KCNA4P22459 653 aa16.03■□□□□ 0.16
ZFC3H1-203ENST00000546606 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
ZFC3H1-203ENST00000546606 DSG3P32926 999 aa15.95■□□□□ 0.14
ZFC3H1-203ENST00000546606 CAPN15O75808 1086 aa15.88■□□□□ 0.13
ZFC3H1-203ENST00000546606 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
ZFC3H1-203ENST00000546606 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
ZFC3H1-203ENST00000546606 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
ZFC3H1-203ENST00000546606 ABCB7O75027 752 aa15.51■□□□□ 0.07
ZFC3H1-203ENST00000546606 APLP2Q06481 763 aa15.51■□□□□ 0.07
ZFC3H1-203ENST00000546606 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
ZFC3H1-203ENST00000546606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
ZFC3H1-203ENST00000546606 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
ZFC3H1-203ENST00000546606 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
ZFC3H1-203ENST00000546606 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
ZFC3H1-203ENST00000546606 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
ZFC3H1-203ENST00000546606 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
ZFC3H1-203ENST00000546606 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
ZFC3H1-203ENST00000546606 POLA2Q14181 598 aa15.08■□□□□ 0
ZFC3H1-203ENST00000546606 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
ZFC3H1-203ENST00000546606 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
ZFC3H1-203ENST00000546606 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
ZFC3H1-203ENST00000546606 ZBTB22O15209 634 aa14.72□□□□□ -0.05
ZFC3H1-203ENST00000546606 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
ZFC3H1-203ENST00000546606 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
ZFC3H1-203ENST00000546606 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
ZFC3H1-203ENST00000546606 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
ZFC3H1-203ENST00000546606 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
ZFC3H1-203ENST00000546606 HAX1O00165 279 aa14.54□□□□□ -0.08
ZFC3H1-203ENST00000546606 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
ZFC3H1-203ENST00000546606 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
ZFC3H1-203ENST00000546606 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
ZFC3H1-203ENST00000546606 EVX2Q03828 476 aa14.39□□□□□ -0.11
ZFC3H1-203ENST00000546606 FBLN2P98095 1184 aa14.33□□□□□ -0.12
ZFC3H1-203ENST00000546606 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
ZFC3H1-203ENST00000546606 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
ZFC3H1-203ENST00000546606 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
ZFC3H1-203ENST00000546606 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
ZFC3H1-203ENST00000546606 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
ZFC3H1-203ENST00000546606 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
ZFC3H1-203ENST00000546606 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
ZFC3H1-203ENST00000546606 LHX8Q68G74 356 aa14.05□□□□□ -0.16
ZFC3H1-203ENST00000546606 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
ZFC3H1-203ENST00000546606 PRKAR2AP13861 404 aaKnown RBP14.03□□□□□ -0.16
ZFC3H1-203ENST00000546606 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
ZFC3H1-203ENST00000546606 GABBR2O75899 941 aa13.99□□□□□ -0.17
ZFC3H1-203ENST00000546606 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
ZFC3H1-203ENST00000546606 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
ZFC3H1-203ENST00000546606 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
ZFC3H1-203ENST00000546606 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
ZFC3H1-203ENST00000546606 EHMT2Q96KQ7 1210 aa13.76□□□□□ -0.21
ZFC3H1-203ENST00000546606 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
ZFC3H1-203ENST00000546606 PLSCR2Q9NRY7 297 aa13.71□□□□□ -0.21
ZFC3H1-203ENST00000546606 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
ZFC3H1-203ENST00000546606 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
ZFC3H1-203ENST00000546606 CLCN6P51797 869 aa13.49□□□□□ -0.25
ZFC3H1-203ENST00000546606 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
ZFC3H1-203ENST00000546606 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
ZFC3H1-203ENST00000546606 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
ZFC3H1-203ENST00000546606 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
ZFC3H1-203ENST00000546606 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
ZFC3H1-203ENST00000546606 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
ZFC3H1-203ENST00000546606 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
ZFC3H1-203ENST00000546606 POTEMA6NI47 508 aa13.27□□□□□ -0.29
ZFC3H1-203ENST00000546606 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
ZFC3H1-203ENST00000546606 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
ZFC3H1-203ENST00000546606 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
ZFC3H1-203ENST00000546606 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
ZFC3H1-203ENST00000546606 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
ZFC3H1-203ENST00000546606 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZFC3H1-203ENST00000546606 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
ZFC3H1-203ENST00000546606 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
ZFC3H1-203ENST00000546606 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
ZFC3H1-203ENST00000546606 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms