RNA–Protein interactions for RNA: ENST00000546584.1

TGFBR1-203, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-203ENST00000546584 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
TGFBR1-203ENST00000546584 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
TGFBR1-203ENST00000546584 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
TGFBR1-203ENST00000546584 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
TGFBR1-203ENST00000546584 FOXD1Q16676 465 aa21.58■■□□□ 1.05
TGFBR1-203ENST00000546584 PLPPR3Q6T4P5 718 aa21.06■□□□□ 0.96
TGFBR1-203ENST00000546584 ADRA2BP18089 450 aa20.43■□□□□ 0.86
TGFBR1-203ENST00000546584 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
TGFBR1-203ENST00000546584 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
TGFBR1-203ENST00000546584 MSH5O43196 834 aa20.05■□□□□ 0.8
TGFBR1-203ENST00000546584 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
TGFBR1-203ENST00000546584 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
TGFBR1-203ENST00000546584 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
TGFBR1-203ENST00000546584 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
TGFBR1-203ENST00000546584 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
TGFBR1-203ENST00000546584 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
TGFBR1-203ENST00000546584 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
TGFBR1-203ENST00000546584 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
TGFBR1-203ENST00000546584 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
TGFBR1-203ENST00000546584 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
TGFBR1-203ENST00000546584 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
TGFBR1-203ENST00000546584 KCNA4P22459 653 aa17.63■□□□□ 0.41
TGFBR1-203ENST00000546584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
TGFBR1-203ENST00000546584 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
TGFBR1-203ENST00000546584 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
TGFBR1-203ENST00000546584 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
TGFBR1-203ENST00000546584 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
TGFBR1-203ENST00000546584 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
TGFBR1-203ENST00000546584 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
TGFBR1-203ENST00000546584 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
TGFBR1-203ENST00000546584 CAPN15O75808 1086 aa16.45■□□□□ 0.22
TGFBR1-203ENST00000546584 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
TGFBR1-203ENST00000546584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
TGFBR1-203ENST00000546584 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
TGFBR1-203ENST00000546584 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
TGFBR1-203ENST00000546584 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
TGFBR1-203ENST00000546584 APLP2Q06481 763 aa16.29■□□□□ 0.2
TGFBR1-203ENST00000546584 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
TGFBR1-203ENST00000546584 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
TGFBR1-203ENST00000546584 ZBTB22O15209 634 aa16.2■□□□□ 0.18
TGFBR1-203ENST00000546584 DSG3P32926 999 aa16.16■□□□□ 0.18
TGFBR1-203ENST00000546584 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
TGFBR1-203ENST00000546584 ABCB7O75027 752 aa16.12■□□□□ 0.17
TGFBR1-203ENST00000546584 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
TGFBR1-203ENST00000546584 POLA2Q14181 598 aa15.85■□□□□ 0.13
TGFBR1-203ENST00000546584 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
TGFBR1-203ENST00000546584 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
TGFBR1-203ENST00000546584 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
TGFBR1-203ENST00000546584 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
TGFBR1-203ENST00000546584 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
TGFBR1-203ENST00000546584 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
TGFBR1-203ENST00000546584 FBLN2P98095 1184 aa15.31■□□□□ 0.04
TGFBR1-203ENST00000546584 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
TGFBR1-203ENST00000546584 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
TGFBR1-203ENST00000546584 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
TGFBR1-203ENST00000546584 SPDYE6P0CI01 402 aa15.04■□□□□ -0
TGFBR1-203ENST00000546584 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
TGFBR1-203ENST00000546584 POTEHQ6S545 545 aa15.01□□□□□ -0.01
TGFBR1-203ENST00000546584 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
TGFBR1-203ENST00000546584 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
TGFBR1-203ENST00000546584 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
TGFBR1-203ENST00000546584 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
TGFBR1-203ENST00000546584 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
TGFBR1-203ENST00000546584 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
TGFBR1-203ENST00000546584 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
TGFBR1-203ENST00000546584 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
TGFBR1-203ENST00000546584 PIP4P2Q8N4L2 257 aa14.7□□□□□ -0.06
TGFBR1-203ENST00000546584 SPDYE4A6NLX3 237 aa14.69□□□□□ -0.06
TGFBR1-203ENST00000546584 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
TGFBR1-203ENST00000546584 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
TGFBR1-203ENST00000546584 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
TGFBR1-203ENST00000546584 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
TGFBR1-203ENST00000546584 HAX1O00165 279 aa14.4□□□□□ -0.1
TGFBR1-203ENST00000546584 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
TGFBR1-203ENST00000546584 FKBP8Q14318 412 aa14.33□□□□□ -0.12
TGFBR1-203ENST00000546584 PROM2Q8N271 834 aa14.25□□□□□ -0.13
TGFBR1-203ENST00000546584 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
TGFBR1-203ENST00000546584 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
TGFBR1-203ENST00000546584 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
TGFBR1-203ENST00000546584 EVX2Q03828 476 aa14.19□□□□□ -0.14
TGFBR1-203ENST00000546584 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
TGFBR1-203ENST00000546584 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
TGFBR1-203ENST00000546584 MIER1Q8N108 512 aa14.01□□□□□ -0.17
TGFBR1-203ENST00000546584 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
TGFBR1-203ENST00000546584 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
TGFBR1-203ENST00000546584 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
TGFBR1-203ENST00000546584 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.17
TGFBR1-203ENST00000546584 ZRANB1Q9UGI0 708 aa13.94□□□□□ -0.18
TGFBR1-203ENST00000546584 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
TGFBR1-203ENST00000546584 GABBR2O75899 941 aa13.89□□□□□ -0.19
TGFBR1-203ENST00000546584 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
TGFBR1-203ENST00000546584 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
TGFBR1-203ENST00000546584 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
TGFBR1-203ENST00000546584 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
TGFBR1-203ENST00000546584 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
TGFBR1-203ENST00000546584 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
TGFBR1-203ENST00000546584 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
TGFBR1-203ENST00000546584 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
TGFBR1-203ENST00000546584 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
TGFBR1-203ENST00000546584 CLCN6P51797 869 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms