RNA–Protein interactions for RNA: ENST00000546509.5

ERGIC2-202, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-202ENST00000546509 AEBP2Q6ZN18 517 aaPredicted RBP38.27■■■■□ 3.72
ERGIC2-202ENST00000546509 CHIC1Q5VXU3 224 aa36.87■■■■□ 3.49
ERGIC2-202ENST00000546509 SENP3Q9H4L4 574 aaPredicted RBP32.66■■■□□ 2.82
ERGIC2-202ENST00000546509 PHF23Q9BUL5 403 aaPredicted RBP32.32■■■□□ 2.76
ERGIC2-202ENST00000546509 FOXD1Q16676 465 aa30.32■■■□□ 2.44
ERGIC2-202ENST00000546509 PLPPR3Q6T4P5 718 aa29.73■■■□□ 2.35
ERGIC2-202ENST00000546509 PPP6R1Q9UPN7 881 aa28.71■■■□□ 2.19
ERGIC2-202ENST00000546509 ADRA2BP18089 450 aa28.66■■■□□ 2.18
ERGIC2-202ENST00000546509 PIAS4Q8N2W9 510 aaPredicted RBP28.49■■■□□ 2.15
ERGIC2-202ENST00000546509 MSH5O43196 834 aa28.26■■■□□ 2.11
ERGIC2-202ENST00000546509 POTEDQ86YR6 584 aa26.68■■□□□ 1.86
ERGIC2-202ENST00000546509 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.81
ERGIC2-202ENST00000546509 MAPK8IP2Q13387 824 aaPredicted RBP26.16■■□□□ 1.78
ERGIC2-202ENST00000546509 PPP4R3CPQ6ZMV5 832 aa26.09■■□□□ 1.77
ERGIC2-202ENST00000546509 DMRT2Q9Y5R5 561 aa25.96■■□□□ 1.75
ERGIC2-202ENST00000546509 CNKSR2Q8WXI2 1034 aa25.52■■□□□ 1.68
ERGIC2-202ENST00000546509 NCBP3Q53F19 620 aaKnown RBP25.31■■□□□ 1.64
ERGIC2-202ENST00000546509 HOXD11P31277 338 aaPredicted RBP25.18■■□□□ 1.62
ERGIC2-202ENST00000546509 RNF216Q9NWF9 866 aaPredicted RBP25.15■■□□□ 1.62
ERGIC2-202ENST00000546509 DCAF8L1A6NGE4 600 aa24.89■■□□□ 1.58
ERGIC2-202ENST00000546509 NPM3O75607 178 aaKnown RBP24.86■■□□□ 1.57
ERGIC2-202ENST00000546509 KCNA4P22459 653 aa24.81■■□□□ 1.56
ERGIC2-202ENST00000546509 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
ERGIC2-202ENST00000546509 RNF39Q9H2S5 420 aa24.12■■□□□ 1.45
ERGIC2-202ENST00000546509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.44
ERGIC2-202ENST00000546509 CACNB1Q02641 598 aaPredicted RBP23.93■■□□□ 1.42
ERGIC2-202ENST00000546509 C1QBPQ07021 282 aaKnown RBP23.83■■□□□ 1.41
ERGIC2-202ENST00000546509 SLC4A2P04920 1241 aa23.59■■□□□ 1.37
ERGIC2-202ENST00000546509 SLC4A1APQ9BWU0 796 aaKnown RBP23.56■■□□□ 1.36
ERGIC2-202ENST00000546509 U3KPZ7 1027 aaPredicted RBP23.53■■□□□ 1.36
ERGIC2-202ENST00000546509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.29
ERGIC2-202ENST00000546509 HNRNPUL2Q1KMD3 747 aaKnown RBP23.14■■□□□ 1.29
ERGIC2-202ENST00000546509 APLP2Q06481 763 aa23.05■■□□□ 1.28
ERGIC2-202ENST00000546509 FOXD4L1Q9NU39 408 aa23.04■■□□□ 1.28
ERGIC2-202ENST00000546509 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
ERGIC2-202ENST00000546509 CAPN15O75808 1086 aa23.02■■□□□ 1.28
ERGIC2-202ENST00000546509 MYCNP04198 464 aaPredicted RBP23.02■■□□□ 1.28
ERGIC2-202ENST00000546509 SAMD1Q6SPF0 538 aaPredicted RBP23.01■■□□□ 1.27
ERGIC2-202ENST00000546509 ZBTB22O15209 634 aa22.79■■□□□ 1.24
ERGIC2-202ENST00000546509 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
ERGIC2-202ENST00000546509 ZNF219Q9P2Y4 722 aaPredicted RBP22.77■■□□□ 1.24
ERGIC2-202ENST00000546509 DSG3P32926 999 aa22.74■■□□□ 1.23
ERGIC2-202ENST00000546509 ABCB7O75027 752 aa22.5■■□□□ 1.19
ERGIC2-202ENST00000546509 ATF5Q9Y2D1 282 aaPredicted RBP22.38■■□□□ 1.17
ERGIC2-202ENST00000546509 ATXN8OSP0DMR3 200 aa22.32■■□□□ 1.16
ERGIC2-202ENST00000546509 POLA2Q14181 598 aa22.26■■□□□ 1.15
ERGIC2-202ENST00000546509 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
ERGIC2-202ENST00000546509 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
ERGIC2-202ENST00000546509 ZBTB12Q9Y330 459 aaPredicted RBP21.92■■□□□ 1.1
ERGIC2-202ENST00000546509 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
ERGIC2-202ENST00000546509 FBLN2P98095 1184 aa21.58■■□□□ 1.05
ERGIC2-202ENST00000546509 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
ERGIC2-202ENST00000546509 MKRN4PQ13434 485 aaPredicted RBP21.38■■□□□ 1.01
ERGIC2-202ENST00000546509 AKT1S1Q96B36 256 aa21.34■■□□□ 1.01
ERGIC2-202ENST00000546509 SPDYE2BA6NHP3 402 aa21.24■□□□□ 0.99
ERGIC2-202ENST00000546509 SPDYE6P0CI01 402 aa21.24■□□□□ 0.99
ERGIC2-202ENST00000546509 SPDYE2Q495Y8 402 aa21.24■□□□□ 0.99
ERGIC2-202ENST00000546509 REM2Q8IYK8 340 aaPredicted RBP21.11■□□□□ 0.97
ERGIC2-202ENST00000546509 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
ERGIC2-202ENST00000546509 CHRDL2Q6WN34 429 aa21.04■□□□□ 0.96
ERGIC2-202ENST00000546509 POTEHQ6S545 545 aa21.03■□□□□ 0.96
ERGIC2-202ENST00000546509 SSUH2Q9Y2M2 353 aa20.98■□□□□ 0.95
ERGIC2-202ENST00000546509 PITPNM1O00562 1244 aa20.87■□□□□ 0.93
ERGIC2-202ENST00000546509 SPDYE1Q8NFV5 336 aaPredicted RBP20.76■□□□□ 0.91
ERGIC2-202ENST00000546509 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
ERGIC2-202ENST00000546509 SPDYE4A6NLX3 237 aa20.68■□□□□ 0.9
ERGIC2-202ENST00000546509 CLEC11AQ9Y240 323 aa20.68■□□□□ 0.9
ERGIC2-202ENST00000546509 PIP4P2Q8N4L2 257 aa20.63■□□□□ 0.89
ERGIC2-202ENST00000546509 FXR2P51116 673 aaKnown RBP eCLIP20.6■□□□□ 0.89
ERGIC2-202ENST00000546509 PRR29P0C7W0 189 aa20.43■□□□□ 0.86
ERGIC2-202ENST00000546509 PRKAR2AP13861 404 aaKnown RBP20.35■□□□□ 0.85
ERGIC2-202ENST00000546509 STAG3Q9UJ98 1225 aa20.35■□□□□ 0.85
ERGIC2-202ENST00000546509 PROM2Q8N271 834 aa20.23■□□□□ 0.83
ERGIC2-202ENST00000546509 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
ERGIC2-202ENST00000546509 HAX1O00165 279 aa20.15■□□□□ 0.82
ERGIC2-202ENST00000546509 FKBP8Q14318 412 aa20.14■□□□□ 0.81
ERGIC2-202ENST00000546509 CREBZFQ9NS37 354 aa19.99■□□□□ 0.79
ERGIC2-202ENST00000546509 FARP1Q9Y4F1 1045 aaPredicted RBP19.98■□□□□ 0.79
ERGIC2-202ENST00000546509 SP7Q8TDD2 431 aaPredicted RBP19.95■□□□□ 0.78
ERGIC2-202ENST00000546509 C19orf67A6NJJ6 358 aa19.92■□□□□ 0.78
ERGIC2-202ENST00000546509 EVX2Q03828 476 aa19.86■□□□□ 0.77
ERGIC2-202ENST00000546509 CD44P16070 742 aaKnown RBP19.74■□□□□ 0.75
ERGIC2-202ENST00000546509 NPM1P06748 294 aaKnown RBP eCLIP19.72■□□□□ 0.75
ERGIC2-202ENST00000546509 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
ERGIC2-202ENST00000546509 MNX1P50219 401 aaPredicted RBP19.7■□□□□ 0.74
ERGIC2-202ENST00000546509 MIER1Q8N108 512 aa19.7■□□□□ 0.74
ERGIC2-202ENST00000546509 FBXO3Q9UK99 471 aa19.65■□□□□ 0.74
ERGIC2-202ENST00000546509 PLCD3Q8N3E9 789 aa19.61■□□□□ 0.73
ERGIC2-202ENST00000546509 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
ERGIC2-202ENST00000546509 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
ERGIC2-202ENST00000546509 GABBR2O75899 941 aa19.5■□□□□ 0.71
ERGIC2-202ENST00000546509 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
ERGIC2-202ENST00000546509 ZNF579Q8NAF0 562 aaKnown RBP19.46■□□□□ 0.71
ERGIC2-202ENST00000546509 CLCN6P51797 869 aa19.45■□□□□ 0.7
ERGIC2-202ENST00000546509 VASPP50552 380 aaPredicted RBP19.34■□□□□ 0.69
ERGIC2-202ENST00000546509 TSPYL2Q9H2G4 693 aaPredicted RBP19.32■□□□□ 0.68
ERGIC2-202ENST00000546509 PHF12Q96QT6 1004 aa19.27■□□□□ 0.68
ERGIC2-202ENST00000546509 RASEFQ8IZ41 740 aa19.25■□□□□ 0.67
ERGIC2-202ENST00000546509 NUBP1P53384 320 aa19.21■□□□□ 0.67
ERGIC2-202ENST00000546509 CCDC61Q9Y6R9 512 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms