RNA–Protein interactions for RNA: ENST00000546491.1

APAF1-204, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 3

Gene APAF1, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-204ENST00000546491 AEBP2Q6ZN18 517 aaPredicted RBP28.81■■■□□ 2.2
APAF1-204ENST00000546491 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
APAF1-204ENST00000546491 PHF23Q9BUL5 403 aaPredicted RBP25.11■■□□□ 1.61
APAF1-204ENST00000546491 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
APAF1-204ENST00000546491 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.33
APAF1-204ENST00000546491 FOXD1Q16676 465 aa22.61■■□□□ 1.21
APAF1-204ENST00000546491 ADRA2BP18089 450 aa22.05■■□□□ 1.12
APAF1-204ENST00000546491 PPP6R1Q9UPN7 881 aa22.03■■□□□ 1.12
APAF1-204ENST00000546491 PIAS4Q8N2W9 510 aaPredicted RBP21.44■■□□□ 1.02
APAF1-204ENST00000546491 MSH5O43196 834 aa20.77■□□□□ 0.92
APAF1-204ENST00000546491 PPP4R3CPQ6ZMV5 832 aa20.63■□□□□ 0.89
APAF1-204ENST00000546491 KCNA4P22459 653 aa20.55■□□□□ 0.88
APAF1-204ENST00000546491 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
APAF1-204ENST00000546491 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
APAF1-204ENST00000546491 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
APAF1-204ENST00000546491 NPM3O75607 178 aaKnown RBP19.89■□□□□ 0.77
APAF1-204ENST00000546491 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
APAF1-204ENST00000546491 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
APAF1-204ENST00000546491 DMRT2Q9Y5R5 561 aa19.58■□□□□ 0.72
APAF1-204ENST00000546491 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
APAF1-204ENST00000546491 RNF216Q9NWF9 866 aaPredicted RBP19.51■□□□□ 0.71
APAF1-204ENST00000546491 HOXD11P31277 338 aaPredicted RBP19.32■□□□□ 0.68
APAF1-204ENST00000546491 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
APAF1-204ENST00000546491 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
APAF1-204ENST00000546491 ZBTB22O15209 634 aa18.88■□□□□ 0.61
APAF1-204ENST00000546491 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
APAF1-204ENST00000546491 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
APAF1-204ENST00000546491 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
APAF1-204ENST00000546491 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
APAF1-204ENST00000546491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
APAF1-204ENST00000546491 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
APAF1-204ENST00000546491 ATXN8OSP0DMR3 200 aa18.19■□□□□ 0.5
APAF1-204ENST00000546491 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
APAF1-204ENST00000546491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
APAF1-204ENST00000546491 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
APAF1-204ENST00000546491 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
APAF1-204ENST00000546491 APLP2Q06481 763 aa17.85■□□□□ 0.45
APAF1-204ENST00000546491 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
APAF1-204ENST00000546491 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
APAF1-204ENST00000546491 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
APAF1-204ENST00000546491 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
APAF1-204ENST00000546491 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
APAF1-204ENST00000546491 CAPN15O75808 1086 aa17.45■□□□□ 0.38
APAF1-204ENST00000546491 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
APAF1-204ENST00000546491 FKBP8Q14318 412 aa17.27■□□□□ 0.36
APAF1-204ENST00000546491 POLA2Q14181 598 aa17.26■□□□□ 0.35
APAF1-204ENST00000546491 FBLN2P98095 1184 aa17.14■□□□□ 0.33
APAF1-204ENST00000546491 ABCB7O75027 752 aa17.12■□□□□ 0.33
APAF1-204ENST00000546491 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
APAF1-204ENST00000546491 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
APAF1-204ENST00000546491 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
APAF1-204ENST00000546491 DSG3P32926 999 aa17.05■□□□□ 0.32
APAF1-204ENST00000546491 SPDYE4A6NLX3 237 aa16.92■□□□□ 0.3
APAF1-204ENST00000546491 PROM2Q8N271 834 aa16.68■□□□□ 0.26
APAF1-204ENST00000546491 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
APAF1-204ENST00000546491 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
APAF1-204ENST00000546491 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
APAF1-204ENST00000546491 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
APAF1-204ENST00000546491 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
APAF1-204ENST00000546491 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
APAF1-204ENST00000546491 SSUH2Q9Y2M2 353 aa16.49■□□□□ 0.23
APAF1-204ENST00000546491 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
APAF1-204ENST00000546491 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
APAF1-204ENST00000546491 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
APAF1-204ENST00000546491 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
APAF1-204ENST00000546491 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
APAF1-204ENST00000546491 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
APAF1-204ENST00000546491 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
APAF1-204ENST00000546491 IFNLR1Q8IU57 520 aaPredicted RBP16.12■□□□□ 0.17
APAF1-204ENST00000546491 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
APAF1-204ENST00000546491 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
APAF1-204ENST00000546491 MIER1Q8N108 512 aa16.02■□□□□ 0.16
APAF1-204ENST00000546491 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
APAF1-204ENST00000546491 REM2Q8IYK8 340 aaPredicted RBP15.98■□□□□ 0.15
APAF1-204ENST00000546491 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
APAF1-204ENST00000546491 SPOCK2Q92563 424 aa15.92■□□□□ 0.14
APAF1-204ENST00000546491 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
APAF1-204ENST00000546491 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
APAF1-204ENST00000546491 PRR29P0C7W0 189 aa15.84■□□□□ 0.13
APAF1-204ENST00000546491 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
APAF1-204ENST00000546491 PKD2Q13563 968 aa15.72■□□□□ 0.11
APAF1-204ENST00000546491 CREBZFQ9NS37 354 aa15.69■□□□□ 0.1
APAF1-204ENST00000546491 CIZ1Q9ULV3 898 aaPredicted RBP15.59■□□□□ 0.09
APAF1-204ENST00000546491 ECM2O94769 699 aaPredicted RBP15.58■□□□□ 0.08
APAF1-204ENST00000546491 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
APAF1-204ENST00000546491 NUBP1P53384 320 aa15.54■□□□□ 0.08
APAF1-204ENST00000546491 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
APAF1-204ENST00000546491 GSE1Q14687 1217 aa15.52■□□□□ 0.08
APAF1-204ENST00000546491 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
APAF1-204ENST00000546491 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
APAF1-204ENST00000546491 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
APAF1-204ENST00000546491 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
APAF1-204ENST00000546491 CHADLQ6NUI6 762 aa15.44■□□□□ 0.06
APAF1-204ENST00000546491 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
APAF1-204ENST00000546491 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
APAF1-204ENST00000546491 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
APAF1-204ENST00000546491 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
APAF1-204ENST00000546491 RGL2O15211 777 aa15.39■□□□□ 0.05
APAF1-204ENST00000546491 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
APAF1-204ENST00000546491 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms