RNA–Protein interactions for RNA: ENST00000545543.1

LMNTD1-211, Transcript of lamin tail domain containing 1, humanhuman

TSL 3

Gene LMNTD1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-211ENST00000545543 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
LMNTD1-211ENST00000545543 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
LMNTD1-211ENST00000545543 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
LMNTD1-211ENST00000545543 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
LMNTD1-211ENST00000545543 FOXD1Q16676 465 aa15.13■□□□□ 0.01
LMNTD1-211ENST00000545543 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
LMNTD1-211ENST00000545543 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
LMNTD1-211ENST00000545543 ADRA2BP18089 450 aa14.25□□□□□ -0.13
LMNTD1-211ENST00000545543 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
LMNTD1-211ENST00000545543 MSH5O43196 834 aa14.14□□□□□ -0.15
LMNTD1-211ENST00000545543 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
LMNTD1-211ENST00000545543 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
LMNTD1-211ENST00000545543 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
LMNTD1-211ENST00000545543 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
LMNTD1-211ENST00000545543 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
LMNTD1-211ENST00000545543 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
LMNTD1-211ENST00000545543 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
LMNTD1-211ENST00000545543 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
LMNTD1-211ENST00000545543 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
LMNTD1-211ENST00000545543 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
LMNTD1-211ENST00000545543 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
LMNTD1-211ENST00000545543 KCNA4P22459 653 aa12.24□□□□□ -0.45
LMNTD1-211ENST00000545543 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
LMNTD1-211ENST00000545543 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
LMNTD1-211ENST00000545543 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
LMNTD1-211ENST00000545543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.96□□□□□ -0.49
LMNTD1-211ENST00000545543 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
LMNTD1-211ENST00000545543 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
LMNTD1-211ENST00000545543 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
LMNTD1-211ENST00000545543 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
LMNTD1-211ENST00000545543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
LMNTD1-211ENST00000545543 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
LMNTD1-211ENST00000545543 APLP2Q06481 763 aa11.48□□□□□ -0.57
LMNTD1-211ENST00000545543 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
LMNTD1-211ENST00000545543 CAPN15O75808 1086 aa11.46□□□□□ -0.57
LMNTD1-211ENST00000545543 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
LMNTD1-211ENST00000545543 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
LMNTD1-211ENST00000545543 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
LMNTD1-211ENST00000545543 DSG3P32926 999 aa11.35□□□□□ -0.59
LMNTD1-211ENST00000545543 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
LMNTD1-211ENST00000545543 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
LMNTD1-211ENST00000545543 ZBTB22O15209 634 aa11.24□□□□□ -0.61
LMNTD1-211ENST00000545543 ABCB7O75027 752 aa11.18□□□□□ -0.62
LMNTD1-211ENST00000545543 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
LMNTD1-211ENST00000545543 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
LMNTD1-211ENST00000545543 POLA2Q14181 598 aa11.05□□□□□ -0.64
LMNTD1-211ENST00000545543 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
LMNTD1-211ENST00000545543 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
LMNTD1-211ENST00000545543 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
LMNTD1-211ENST00000545543 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
LMNTD1-211ENST00000545543 FBLN2P98095 1184 aa10.71□□□□□ -0.69
LMNTD1-211ENST00000545543 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
LMNTD1-211ENST00000545543 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
LMNTD1-211ENST00000545543 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
LMNTD1-211ENST00000545543 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
LMNTD1-211ENST00000545543 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
LMNTD1-211ENST00000545543 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
LMNTD1-211ENST00000545543 POTEHQ6S545 545 aa10.57□□□□□ -0.72
LMNTD1-211ENST00000545543 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
LMNTD1-211ENST00000545543 REM2Q8IYK8 340 aaPredicted RBP10.52□□□□□ -0.73
LMNTD1-211ENST00000545543 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
LMNTD1-211ENST00000545543 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
LMNTD1-211ENST00000545543 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
LMNTD1-211ENST00000545543 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
LMNTD1-211ENST00000545543 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
LMNTD1-211ENST00000545543 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
LMNTD1-211ENST00000545543 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
LMNTD1-211ENST00000545543 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
LMNTD1-211ENST00000545543 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
LMNTD1-211ENST00000545543 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
LMNTD1-211ENST00000545543 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
LMNTD1-211ENST00000545543 STAG3Q9UJ98 1225 aa10.1□□□□□ -0.79
LMNTD1-211ENST00000545543 HAX1O00165 279 aa10.07□□□□□ -0.8
LMNTD1-211ENST00000545543 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
LMNTD1-211ENST00000545543 PROM2Q8N271 834 aa10.01□□□□□ -0.81
LMNTD1-211ENST00000545543 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
LMNTD1-211ENST00000545543 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
LMNTD1-211ENST00000545543 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
LMNTD1-211ENST00000545543 CREBZFQ9NS37 354 aa9.93□□□□□ -0.82
LMNTD1-211ENST00000545543 EVX2Q03828 476 aa9.91□□□□□ -0.82
LMNTD1-211ENST00000545543 FKBP8Q14318 412 aa9.9□□□□□ -0.82
LMNTD1-211ENST00000545543 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
LMNTD1-211ENST00000545543 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
LMNTD1-211ENST00000545543 MNX1P50219 401 aaPredicted RBP9.78□□□□□ -0.84
LMNTD1-211ENST00000545543 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
LMNTD1-211ENST00000545543 GABBR2O75899 941 aa9.73□□□□□ -0.85
LMNTD1-211ENST00000545543 CLCN6P51797 869 aa9.73□□□□□ -0.85
LMNTD1-211ENST00000545543 MIER1Q8N108 512 aa9.73□□□□□ -0.85
LMNTD1-211ENST00000545543 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
LMNTD1-211ENST00000545543 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.86
LMNTD1-211ENST00000545543 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
LMNTD1-211ENST00000545543 FBXO3Q9UK99 471 aa9.69□□□□□ -0.86
LMNTD1-211ENST00000545543 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
LMNTD1-211ENST00000545543 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
LMNTD1-211ENST00000545543 PHF12Q96QT6 1004 aa9.58□□□□□ -0.88
LMNTD1-211ENST00000545543 TSPYL2Q9H2G4 693 aaPredicted RBP9.58□□□□□ -0.88
LMNTD1-211ENST00000545543 GALR2O43603 387 aaPredicted RBP9.54□□□□□ -0.88
LMNTD1-211ENST00000545543 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
LMNTD1-211ENST00000545543 DCBLD2Q96PD2 775 aa9.54□□□□□ -0.88
LMNTD1-211ENST00000545543 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms