RNA–Protein interactions for RNA: ENST00000545023.1

PTPRO-212, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 5

Gene PTPRO, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-212ENST00000545023 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
PTPRO-212ENST00000545023 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
PTPRO-212ENST00000545023 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
PTPRO-212ENST00000545023 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
PTPRO-212ENST00000545023 FOXD1Q16676 465 aa24.06■■□□□ 1.44
PTPRO-212ENST00000545023 MSH5O43196 834 aa22.87■■□□□ 1.25
PTPRO-212ENST00000545023 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
PTPRO-212ENST00000545023 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
PTPRO-212ENST00000545023 PIAS4Q8N2W9 510 aaPredicted RBP22.48■■□□□ 1.19
PTPRO-212ENST00000545023 PPP6R1Q9UPN7 881 aa22.13■■□□□ 1.13
PTPRO-212ENST00000545023 ADRA2BP18089 450 aa22.08■■□□□ 1.13
PTPRO-212ENST00000545023 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
PTPRO-212ENST00000545023 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
PTPRO-212ENST00000545023 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
PTPRO-212ENST00000545023 CACNB1Q02641 598 aaPredicted RBP19.77■□□□□ 0.76
PTPRO-212ENST00000545023 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
PTPRO-212ENST00000545023 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
PTPRO-212ENST00000545023 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
PTPRO-212ENST00000545023 CNKSR2Q8WXI2 1034 aa19.45■□□□□ 0.7
PTPRO-212ENST00000545023 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
PTPRO-212ENST00000545023 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
PTPRO-212ENST00000545023 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
PTPRO-212ENST00000545023 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
PTPRO-212ENST00000545023 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
PTPRO-212ENST00000545023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.58
PTPRO-212ENST00000545023 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
PTPRO-212ENST00000545023 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
PTPRO-212ENST00000545023 CAPN15O75808 1086 aa18.05■□□□□ 0.48
PTPRO-212ENST00000545023 DSG3P32926 999 aa17.99■□□□□ 0.47
PTPRO-212ENST00000545023 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
PTPRO-212ENST00000545023 APLP2Q06481 763 aa17.92■□□□□ 0.46
PTPRO-212ENST00000545023 POTEHQ6S545 545 aa17.81■□□□□ 0.44
PTPRO-212ENST00000545023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
PTPRO-212ENST00000545023 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
PTPRO-212ENST00000545023 KCNA4P22459 653 aa17.76■□□□□ 0.43
PTPRO-212ENST00000545023 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
PTPRO-212ENST00000545023 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
PTPRO-212ENST00000545023 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.41
PTPRO-212ENST00000545023 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
PTPRO-212ENST00000545023 ABCB7O75027 752 aa17.5■□□□□ 0.39
PTPRO-212ENST00000545023 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
PTPRO-212ENST00000545023 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
PTPRO-212ENST00000545023 POLA2Q14181 598 aa17.09■□□□□ 0.33
PTPRO-212ENST00000545023 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
PTPRO-212ENST00000545023 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-212ENST00000545023 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
PTPRO-212ENST00000545023 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
PTPRO-212ENST00000545023 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
PTPRO-212ENST00000545023 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
PTPRO-212ENST00000545023 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
PTPRO-212ENST00000545023 SP7Q8TDD2 431 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-212ENST00000545023 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
PTPRO-212ENST00000545023 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
PTPRO-212ENST00000545023 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
PTPRO-212ENST00000545023 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
PTPRO-212ENST00000545023 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPRO-212ENST00000545023 HAX1O00165 279 aa16.32■□□□□ 0.2
PTPRO-212ENST00000545023 FBLN2P98095 1184 aa16.29■□□□□ 0.2
PTPRO-212ENST00000545023 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
PTPRO-212ENST00000545023 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
PTPRO-212ENST00000545023 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
PTPRO-212ENST00000545023 ZBTB22O15209 634 aa16.23■□□□□ 0.19
PTPRO-212ENST00000545023 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
PTPRO-212ENST00000545023 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
PTPRO-212ENST00000545023 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
PTPRO-212ENST00000545023 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
PTPRO-212ENST00000545023 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
PTPRO-212ENST00000545023 EVX2Q03828 476 aa15.88■□□□□ 0.13
PTPRO-212ENST00000545023 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
PTPRO-212ENST00000545023 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
PTPRO-212ENST00000545023 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
PTPRO-212ENST00000545023 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPRO-212ENST00000545023 GABBR2O75899 941 aa15.65■□□□□ 0.1
PTPRO-212ENST00000545023 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
PTPRO-212ENST00000545023 CLCN6P51797 869 aa15.57■□□□□ 0.08
PTPRO-212ENST00000545023 LHX8Q68G74 356 aa15.51■□□□□ 0.07
PTPRO-212ENST00000545023 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
PTPRO-212ENST00000545023 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
PTPRO-212ENST00000545023 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
PTPRO-212ENST00000545023 DCBLD2Q96PD2 775 aa15.27■□□□□ 0.04
PTPRO-212ENST00000545023 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
PTPRO-212ENST00000545023 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
PTPRO-212ENST00000545023 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
PTPRO-212ENST00000545023 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
PTPRO-212ENST00000545023 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
PTPRO-212ENST00000545023 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
PTPRO-212ENST00000545023 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
PTPRO-212ENST00000545023 NPM1P06748 294 aaKnown RBP eCLIP15.05■□□□□ -0
PTPRO-212ENST00000545023 GALR2O43603 387 aaPredicted RBP14.96□□□□□ -0.01
PTPRO-212ENST00000545023 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
PTPRO-212ENST00000545023 PHF12Q96QT6 1004 aa14.85□□□□□ -0.03
PTPRO-212ENST00000545023 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
PTPRO-212ENST00000545023 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
PTPRO-212ENST00000545023 PLSCR2Q9NRY7 297 aa14.78□□□□□ -0.04
PTPRO-212ENST00000545023 C7P10643 843 aa14.72□□□□□ -0.05
PTPRO-212ENST00000545023 ASTLQ6HA08 431 aaPredicted RBP14.72□□□□□ -0.05
PTPRO-212ENST00000545023 SLC39A7Q92504 469 aa14.72□□□□□ -0.05
PTPRO-212ENST00000545023 POTEB2H3BUK9 544 aa14.69□□□□□ -0.06
PTPRO-212ENST00000545023 MAMSTRQ6ZN01 415 aa14.69□□□□□ -0.06
PTPRO-212ENST00000545023 MS4A3Q96HJ5 214 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms