RNA–Protein interactions for RNA: ENST00000544938.1

MMP20-203, Transcript of matrix metallopeptidase 20, humanhuman

TSL 3

Gene MMP20, Length 662 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20-203ENST00000544938 AEBP2Q6ZN18 517 aaPredicted RBP29.96■■■□□ 2.39
MMP20-203ENST00000544938 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
MMP20-203ENST00000544938 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
MMP20-203ENST00000544938 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
MMP20-203ENST00000544938 FOXD1Q16676 465 aa23.92■■□□□ 1.42
MMP20-203ENST00000544938 POTEDQ86YR6 584 aa22.71■■□□□ 1.23
MMP20-203ENST00000544938 MSH5O43196 834 aa22.46■■□□□ 1.19
MMP20-203ENST00000544938 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
MMP20-203ENST00000544938 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
MMP20-203ENST00000544938 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
MMP20-203ENST00000544938 ADRA2BP18089 450 aa21.97■■□□□ 1.11
MMP20-203ENST00000544938 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
MMP20-203ENST00000544938 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
MMP20-203ENST00000544938 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
MMP20-203ENST00000544938 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
MMP20-203ENST00000544938 CACNB1Q02641 598 aaPredicted RBP19.57■□□□□ 0.72
MMP20-203ENST00000544938 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
MMP20-203ENST00000544938 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
MMP20-203ENST00000544938 HOXD11P31277 338 aaPredicted RBP19.3■□□□□ 0.68
MMP20-203ENST00000544938 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
MMP20-203ENST00000544938 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
MMP20-203ENST00000544938 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
MMP20-203ENST00000544938 C1QBPQ07021 282 aaKnown RBP18.85■□□□□ 0.61
MMP20-203ENST00000544938 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
MMP20-203ENST00000544938 NPM3O75607 178 aaKnown RBP18.59■□□□□ 0.57
MMP20-203ENST00000544938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
MMP20-203ENST00000544938 KCNA4P22459 653 aa18.22■□□□□ 0.51
MMP20-203ENST00000544938 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
MMP20-203ENST00000544938 SPINK5Q9NQ38 1064 aaPredicted RBP17.86■□□□□ 0.45
MMP20-203ENST00000544938 DSG3P32926 999 aa17.83■□□□□ 0.44
MMP20-203ENST00000544938 CAPN15O75808 1086 aa17.8■□□□□ 0.44
MMP20-203ENST00000544938 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
MMP20-203ENST00000544938 POTEHQ6S545 545 aa17.7■□□□□ 0.42
MMP20-203ENST00000544938 APLP2Q06481 763 aa17.58■□□□□ 0.4
MMP20-203ENST00000544938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
MMP20-203ENST00000544938 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
MMP20-203ENST00000544938 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
MMP20-203ENST00000544938 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
MMP20-203ENST00000544938 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
MMP20-203ENST00000544938 ABCB7O75027 752 aa17.38■□□□□ 0.37
MMP20-203ENST00000544938 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
MMP20-203ENST00000544938 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
MMP20-203ENST00000544938 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
MMP20-203ENST00000544938 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
MMP20-203ENST00000544938 POLA2Q14181 598 aa16.9■□□□□ 0.3
MMP20-203ENST00000544938 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
MMP20-203ENST00000544938 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
MMP20-203ENST00000544938 ZBTB22O15209 634 aa16.72■□□□□ 0.27
MMP20-203ENST00000544938 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
MMP20-203ENST00000544938 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
MMP20-203ENST00000544938 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
MMP20-203ENST00000544938 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
MMP20-203ENST00000544938 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
MMP20-203ENST00000544938 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
MMP20-203ENST00000544938 PIP4P2Q8N4L2 257 aa16.32■□□□□ 0.2
MMP20-203ENST00000544938 FBLN2P98095 1184 aa16.23■□□□□ 0.19
MMP20-203ENST00000544938 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
MMP20-203ENST00000544938 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
MMP20-203ENST00000544938 HAX1O00165 279 aa16.14■□□□□ 0.17
MMP20-203ENST00000544938 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
MMP20-203ENST00000544938 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
MMP20-203ENST00000544938 SPDYE2Q495Y8 402 aa16.12■□□□□ 0.17
MMP20-203ENST00000544938 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
MMP20-203ENST00000544938 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
MMP20-203ENST00000544938 EVX2Q03828 476 aa15.98■□□□□ 0.15
MMP20-203ENST00000544938 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
MMP20-203ENST00000544938 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
MMP20-203ENST00000544938 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
MMP20-203ENST00000544938 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
MMP20-203ENST00000544938 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
MMP20-203ENST00000544938 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
MMP20-203ENST00000544938 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
MMP20-203ENST00000544938 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
MMP20-203ENST00000544938 GABBR2O75899 941 aa15.54■□□□□ 0.08
MMP20-203ENST00000544938 CHADLQ6NUI6 762 aa15.54■□□□□ 0.08
MMP20-203ENST00000544938 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
MMP20-203ENST00000544938 LHX8Q68G74 356 aa15.37■□□□□ 0.05
MMP20-203ENST00000544938 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
MMP20-203ENST00000544938 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
MMP20-203ENST00000544938 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
MMP20-203ENST00000544938 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
MMP20-203ENST00000544938 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
MMP20-203ENST00000544938 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
MMP20-203ENST00000544938 CLCN6P51797 869 aa15.07■□□□□ 0
MMP20-203ENST00000544938 DCBLD2Q96PD2 775 aa14.99□□□□□ -0.01
MMP20-203ENST00000544938 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
MMP20-203ENST00000544938 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
MMP20-203ENST00000544938 PROM2Q8N271 834 aa14.95□□□□□ -0.02
MMP20-203ENST00000544938 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
MMP20-203ENST00000544938 GALR2O43603 387 aaPredicted RBP14.87□□□□□ -0.03
MMP20-203ENST00000544938 PAK3O75914 559 aaPredicted RBP14.87□□□□□ -0.03
MMP20-203ENST00000544938 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
MMP20-203ENST00000544938 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
MMP20-203ENST00000544938 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
MMP20-203ENST00000544938 OTUD5Q96G74 571 aa14.74□□□□□ -0.05
MMP20-203ENST00000544938 PLSCR2Q9NRY7 297 aa14.72□□□□□ -0.05
MMP20-203ENST00000544938 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
MMP20-203ENST00000544938 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
MMP20-203ENST00000544938 MIER1Q8N108 512 aa14.61□□□□□ -0.07
MMP20-203ENST00000544938 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms