RNA–Protein interactions for RNA: ENST00000544706.1

PTPRO-211, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 2

Gene PTPRO, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-211ENST00000544706 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
PTPRO-211ENST00000544706 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
PTPRO-211ENST00000544706 PHF23Q9BUL5 403 aaPredicted RBP25.76■■□□□ 1.71
PTPRO-211ENST00000544706 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
PTPRO-211ENST00000544706 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
PTPRO-211ENST00000544706 FOXD1Q16676 465 aa23.55■■□□□ 1.36
PTPRO-211ENST00000544706 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
PTPRO-211ENST00000544706 ADRA2BP18089 450 aa22.69■■□□□ 1.22
PTPRO-211ENST00000544706 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
PTPRO-211ENST00000544706 MSH5O43196 834 aa21.68■■□□□ 1.06
PTPRO-211ENST00000544706 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
PTPRO-211ENST00000544706 POTEDQ86YR6 584 aa20.92■□□□□ 0.94
PTPRO-211ENST00000544706 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
PTPRO-211ENST00000544706 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
PTPRO-211ENST00000544706 KCNA4P22459 653 aa20.56■□□□□ 0.88
PTPRO-211ENST00000544706 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
PTPRO-211ENST00000544706 CNKSR2Q8WXI2 1034 aa20.37■□□□□ 0.85
PTPRO-211ENST00000544706 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
PTPRO-211ENST00000544706 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
PTPRO-211ENST00000544706 RNF216Q9NWF9 866 aaPredicted RBP19.96■□□□□ 0.79
PTPRO-211ENST00000544706 HOXD11P31277 338 aaPredicted RBP19.87■□□□□ 0.77
PTPRO-211ENST00000544706 SLC4A1APQ9BWU0 796 aaKnown RBP19.59■□□□□ 0.73
PTPRO-211ENST00000544706 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
PTPRO-211ENST00000544706 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
PTPRO-211ENST00000544706 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
PTPRO-211ENST00000544706 SLC4A2P04920 1241 aa19.02■□□□□ 0.64
PTPRO-211ENST00000544706 ZBTB22O15209 634 aa18.93■□□□□ 0.62
PTPRO-211ENST00000544706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTPRO-211ENST00000544706 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
PTPRO-211ENST00000544706 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
PTPRO-211ENST00000544706 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
PTPRO-211ENST00000544706 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
PTPRO-211ENST00000544706 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
PTPRO-211ENST00000544706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
PTPRO-211ENST00000544706 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
PTPRO-211ENST00000544706 C1QBPQ07021 282 aaKnown RBP18.37■□□□□ 0.53
PTPRO-211ENST00000544706 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
PTPRO-211ENST00000544706 ATXN8OSP0DMR3 200 aa18.24■□□□□ 0.51
PTPRO-211ENST00000544706 APLP2Q06481 763 aa18.2■□□□□ 0.5
PTPRO-211ENST00000544706 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
PTPRO-211ENST00000544706 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
PTPRO-211ENST00000544706 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-211ENST00000544706 CAPN15O75808 1086 aa18.02■□□□□ 0.48
PTPRO-211ENST00000544706 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
PTPRO-211ENST00000544706 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
PTPRO-211ENST00000544706 DSG3P32926 999 aa17.71■□□□□ 0.43
PTPRO-211ENST00000544706 ABCB7O75027 752 aa17.69■□□□□ 0.42
PTPRO-211ENST00000544706 POLA2Q14181 598 aa17.67■□□□□ 0.42
PTPRO-211ENST00000544706 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-211ENST00000544706 FBLN2P98095 1184 aa17.34■□□□□ 0.37
PTPRO-211ENST00000544706 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
PTPRO-211ENST00000544706 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
PTPRO-211ENST00000544706 FKBP8Q14318 412 aa17.04■□□□□ 0.32
PTPRO-211ENST00000544706 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
PTPRO-211ENST00000544706 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
PTPRO-211ENST00000544706 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
PTPRO-211ENST00000544706 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
PTPRO-211ENST00000544706 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
PTPRO-211ENST00000544706 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-211ENST00000544706 SSUH2Q9Y2M2 353 aa16.81■□□□□ 0.28
PTPRO-211ENST00000544706 PROM2Q8N271 834 aa16.71■□□□□ 0.27
PTPRO-211ENST00000544706 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
PTPRO-211ENST00000544706 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTPRO-211ENST00000544706 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
PTPRO-211ENST00000544706 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
PTPRO-211ENST00000544706 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
PTPRO-211ENST00000544706 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
PTPRO-211ENST00000544706 POTEHQ6S545 545 aa16.35■□□□□ 0.21
PTPRO-211ENST00000544706 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
PTPRO-211ENST00000544706 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.2
PTPRO-211ENST00000544706 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
PTPRO-211ENST00000544706 VASPP50552 380 aaPredicted RBP16.19■□□□□ 0.18
PTPRO-211ENST00000544706 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
PTPRO-211ENST00000544706 MIER1Q8N108 512 aa16.08■□□□□ 0.16
PTPRO-211ENST00000544706 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
PTPRO-211ENST00000544706 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPRO-211ENST00000544706 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
PTPRO-211ENST00000544706 IFNLR1Q8IU57 520 aaPredicted RBP15.99■□□□□ 0.15
PTPRO-211ENST00000544706 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
PTPRO-211ENST00000544706 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
PTPRO-211ENST00000544706 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
PTPRO-211ENST00000544706 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
PTPRO-211ENST00000544706 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
PTPRO-211ENST00000544706 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
PTPRO-211ENST00000544706 MNX1P50219 401 aaPredicted RBP15.86■□□□□ 0.13
PTPRO-211ENST00000544706 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
PTPRO-211ENST00000544706 SPOCK2Q92563 424 aa15.78■□□□□ 0.12
PTPRO-211ENST00000544706 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPRO-211ENST00000544706 NUBP1P53384 320 aa15.68■□□□□ 0.1
PTPRO-211ENST00000544706 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
PTPRO-211ENST00000544706 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
PTPRO-211ENST00000544706 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
PTPRO-211ENST00000544706 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
PTPRO-211ENST00000544706 DCAF8Q5TAQ9 597 aa15.52■□□□□ 0.08
PTPRO-211ENST00000544706 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
PTPRO-211ENST00000544706 GSE1Q14687 1217 aa15.5■□□□□ 0.07
PTPRO-211ENST00000544706 TSPYL2Q9H2G4 693 aaPredicted RBP15.49■□□□□ 0.07
PTPRO-211ENST00000544706 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
PTPRO-211ENST00000544706 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
PTPRO-211ENST00000544706 PKD2Q13563 968 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms