RNA–Protein interactions for RNA: ENST00000544697.1

C12orf4-208, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 5

Gene C12orf4, Length 685 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-208ENST00000544697 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
C12orf4-208ENST00000544697 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
C12orf4-208ENST00000544697 SENP3Q9H4L4 574 aaPredicted RBP24.46■■□□□ 1.51
C12orf4-208ENST00000544697 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
C12orf4-208ENST00000544697 FOXD1Q16676 465 aa22.89■■□□□ 1.25
C12orf4-208ENST00000544697 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
C12orf4-208ENST00000544697 MSH5O43196 834 aa21.4■■□□□ 1.02
C12orf4-208ENST00000544697 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
C12orf4-208ENST00000544697 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
C12orf4-208ENST00000544697 POTEDQ86YR6 584 aa21.27■■□□□ 1
C12orf4-208ENST00000544697 ADRA2BP18089 450 aa21.22■□□□□ 0.99
C12orf4-208ENST00000544697 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
C12orf4-208ENST00000544697 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
C12orf4-208ENST00000544697 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
C12orf4-208ENST00000544697 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
C12orf4-208ENST00000544697 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
C12orf4-208ENST00000544697 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
C12orf4-208ENST00000544697 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
C12orf4-208ENST00000544697 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
C12orf4-208ENST00000544697 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
C12orf4-208ENST00000544697 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
C12orf4-208ENST00000544697 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
C12orf4-208ENST00000544697 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
C12orf4-208ENST00000544697 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
C12orf4-208ENST00000544697 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
C12orf4-208ENST00000544697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
C12orf4-208ENST00000544697 KCNA4P22459 653 aa17.38■□□□□ 0.37
C12orf4-208ENST00000544697 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
C12orf4-208ENST00000544697 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
C12orf4-208ENST00000544697 CAPN15O75808 1086 aa17.13■□□□□ 0.33
C12orf4-208ENST00000544697 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
C12orf4-208ENST00000544697 DSG3P32926 999 aa17.09■□□□□ 0.33
C12orf4-208ENST00000544697 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
C12orf4-208ENST00000544697 ABCB7O75027 752 aa16.76■□□□□ 0.27
C12orf4-208ENST00000544697 APLP2Q06481 763 aa16.72■□□□□ 0.27
C12orf4-208ENST00000544697 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
C12orf4-208ENST00000544697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
C12orf4-208ENST00000544697 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
C12orf4-208ENST00000544697 POTEHQ6S545 545 aa16.62■□□□□ 0.25
C12orf4-208ENST00000544697 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
C12orf4-208ENST00000544697 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
C12orf4-208ENST00000544697 POLA2Q14181 598 aa16.33■□□□□ 0.2
C12orf4-208ENST00000544697 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
C12orf4-208ENST00000544697 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
C12orf4-208ENST00000544697 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
C12orf4-208ENST00000544697 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
C12orf4-208ENST00000544697 ZBTB22O15209 634 aa16.02■□□□□ 0.16
C12orf4-208ENST00000544697 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
C12orf4-208ENST00000544697 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
C12orf4-208ENST00000544697 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
C12orf4-208ENST00000544697 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
C12orf4-208ENST00000544697 REM2Q8IYK8 340 aaPredicted RBP15.74■□□□□ 0.11
C12orf4-208ENST00000544697 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
C12orf4-208ENST00000544697 PIP4P2Q8N4L2 257 aa15.6■□□□□ 0.09
C12orf4-208ENST00000544697 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
C12orf4-208ENST00000544697 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
C12orf4-208ENST00000544697 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
C12orf4-208ENST00000544697 FBLN2P98095 1184 aa15.45■□□□□ 0.06
C12orf4-208ENST00000544697 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
C12orf4-208ENST00000544697 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
C12orf4-208ENST00000544697 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
C12orf4-208ENST00000544697 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
C12orf4-208ENST00000544697 HAX1O00165 279 aa15.35■□□□□ 0.05
C12orf4-208ENST00000544697 EVX2Q03828 476 aa15.24■□□□□ 0.03
C12orf4-208ENST00000544697 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
C12orf4-208ENST00000544697 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
C12orf4-208ENST00000544697 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
C12orf4-208ENST00000544697 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
C12orf4-208ENST00000544697 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
C12orf4-208ENST00000544697 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
C12orf4-208ENST00000544697 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
C12orf4-208ENST00000544697 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
C12orf4-208ENST00000544697 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
C12orf4-208ENST00000544697 C19orf67A6NJJ6 358 aa14.98□□□□□ -0.01
C12orf4-208ENST00000544697 PRR29P0C7W0 189 aa14.92□□□□□ -0.02
C12orf4-208ENST00000544697 GABBR2O75899 941 aa14.81□□□□□ -0.04
C12orf4-208ENST00000544697 FARP1Q9Y4F1 1045 aaPredicted RBP14.72□□□□□ -0.05
C12orf4-208ENST00000544697 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
C12orf4-208ENST00000544697 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
C12orf4-208ENST00000544697 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
C12orf4-208ENST00000544697 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
C12orf4-208ENST00000544697 LHX8Q68G74 356 aa14.53□□□□□ -0.08
C12orf4-208ENST00000544697 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
C12orf4-208ENST00000544697 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
C12orf4-208ENST00000544697 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
C12orf4-208ENST00000544697 CLCN6P51797 869 aa14.39□□□□□ -0.11
C12orf4-208ENST00000544697 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
C12orf4-208ENST00000544697 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
C12orf4-208ENST00000544697 MNX1P50219 401 aaPredicted RBP14.3□□□□□ -0.12
C12orf4-208ENST00000544697 PHF12Q96QT6 1004 aa14.27□□□□□ -0.13
C12orf4-208ENST00000544697 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.13
C12orf4-208ENST00000544697 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
C12orf4-208ENST00000544697 PROM2Q8N271 834 aa14.18□□□□□ -0.14
C12orf4-208ENST00000544697 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
C12orf4-208ENST00000544697 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
C12orf4-208ENST00000544697 MS4A3Q96HJ5 214 aa14.05□□□□□ -0.16
C12orf4-208ENST00000544697 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
C12orf4-208ENST00000544697 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
C12orf4-208ENST00000544697 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.17
C12orf4-208ENST00000544697 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms