RNA–Protein interactions for RNA: ENST00000544125.1

MDM2-231, Transcript of MDM2 proto-oncogene, human

TSL 2

Gene MDM2, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-231	ENST00000544125	AEBP2	Q6ZN18	517 aa	Predicted RBP	23.35	■■□□□ 1.33
MDM2-231	ENST00000544125	CHIC1	Q5VXU3	224 aa		22.93	■■□□□ 1.26
MDM2-231	ENST00000544125	PHF23	Q9BUL5	403 aa	Predicted RBP	20.17	■□□□□ 0.82
MDM2-231	ENST00000544125	SENP3	Q9H4L4	574 aa	Predicted RBP	19.83	■□□□□ 0.77
MDM2-231	ENST00000544125	PLPPR3	Q6T4P5	718 aa		18.71	■□□□□ 0.59
MDM2-231	ENST00000544125	FOXD1	Q16676	465 aa		18.37	■□□□□ 0.53
MDM2-231	ENST00000544125	ADRA2B	P18089	450 aa		17.78	■□□□□ 0.44
MDM2-231	ENST00000544125	PPP6R1	Q9UPN7	881 aa		17.77	■□□□□ 0.44
MDM2-231	ENST00000544125	PIAS4	Q8N2W9	510 aa	Predicted RBP	17.39	■□□□□ 0.37
MDM2-231	ENST00000544125	MSH5	O43196	834 aa		16.92	■□□□□ 0.3
MDM2-231	ENST00000544125	PPP4R3CP	Q6ZMV5	832 aa		16.5	■□□□□ 0.23
MDM2-231	ENST00000544125	SCAF1	Q9H7N4	1312 aa	Known RBP	16.31	■□□□□ 0.2
MDM2-231	ENST00000544125	KCNA4	P22459	653 aa		16.23	■□□□□ 0.19
MDM2-231	ENST00000544125	NCBP3	Q53F19	620 aa	Known RBP	16.13	■□□□□ 0.17
MDM2-231	ENST00000544125	MAPK8IP2	Q13387	824 aa	Predicted RBP	16.1	■□□□□ 0.17
MDM2-231	ENST00000544125	CNKSR2	Q8WXI2	1034 aa		16	■□□□□ 0.15
MDM2-231	ENST00000544125	NPM3	O75607	178 aa	Known RBP	15.85	■□□□□ 0.13
MDM2-231	ENST00000544125	DMRT2	Q9Y5R5	561 aa		15.83	■□□□□ 0.12
MDM2-231	ENST00000544125	RNF216	Q9NWF9	866 aa	Predicted RBP	15.65	■□□□□ 0.1
MDM2-231	ENST00000544125	HOXD11	P31277	338 aa	Predicted RBP	15.53	■□□□□ 0.08
MDM2-231	ENST00000544125	SLC4A1AP	Q9BWU0	796 aa	Known RBP	15.51	■□□□□ 0.07
MDM2-231	ENST00000544125	DNAJC5B	Q9UF47	199 aa		15.3	■□□□□ 0.04
MDM2-231	ENST00000544125	DCAF8L1	A6NGE4	600 aa		15.23	■□□□□ 0.03
MDM2-231	ENST00000544125	EHMT2	Q96KQ7	1210 aa		15.23	■□□□□ 0.03
MDM2-231	ENST00000544125	POTED	Q86YR6	584 aa		15.18	■□□□□ 0.02
MDM2-231	ENST00000544125	CSRNP3	Q8WYN3	585 aa		14.94	□□□□□ -0.02
MDM2-231	ENST00000544125	SLC4A2	P04920	1241 aa		14.92	□□□□□ -0.02
MDM2-231	ENST00000544125	FOXD4L1	Q9NU39	408 aa		14.92	□□□□□ -0.02
MDM2-231	ENST00000544125	ZBTB22	O15209	634 aa		14.91	□□□□□ -0.02
MDM2-231	ENST00000544125	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.88	□□□□□ -0.03
MDM2-231	ENST00000544125	MYCN	P04198	464 aa	Predicted RBP	14.66	□□□□□ -0.06
MDM2-231	ENST00000544125		U3KPZ7	1027 aa	Predicted RBP	14.59	□□□□□ -0.07
MDM2-231	ENST00000544125	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.5	□□□□□ -0.09
MDM2-231	ENST00000544125	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.5	□□□□□ -0.09
MDM2-231	ENST00000544125	RNF39	Q9H2S5	420 aa		14.48	□□□□□ -0.09
MDM2-231	ENST00000544125	SAMD1	Q6SPF0	538 aa	Predicted RBP	14.44	□□□□□ -0.1
MDM2-231	ENST00000544125	ATXN8OS	P0DMR3	200 aa		14.37	□□□□□ -0.11
MDM2-231	ENST00000544125	C1QBP	Q07021	282 aa	Known RBP	14.34	□□□□□ -0.11
MDM2-231	ENST00000544125	APLP2	Q06481	763 aa		14.33	□□□□□ -0.12
MDM2-231	ENST00000544125	ATF5	Q9Y2D1	282 aa	Predicted RBP	14.23	□□□□□ -0.13
MDM2-231	ENST00000544125	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.17	□□□□□ -0.14
MDM2-231	ENST00000544125	CAPN15	O75808	1086 aa		14.15	□□□□□ -0.14
MDM2-231	ENST00000544125	TRH	P20396	242 aa	Predicted RBP	14.12	□□□□□ -0.15
MDM2-231	ENST00000544125	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.09	□□□□□ -0.15
MDM2-231	ENST00000544125	CACNB1	Q02641	598 aa	Predicted RBP	14.08	□□□□□ -0.16
MDM2-231	ENST00000544125	POLA2	Q14181	598 aa		13.89	□□□□□ -0.19
MDM2-231	ENST00000544125	ABCB7	O75027	752 aa		13.88	□□□□□ -0.19
MDM2-231	ENST00000544125	DSG3	P32926	999 aa		13.84	□□□□□ -0.19
MDM2-231	ENST00000544125	FBLN2	P98095	1184 aa		13.69	□□□□□ -0.22
MDM2-231	ENST00000544125	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.67	□□□□□ -0.22
MDM2-231	ENST00000544125	MKRN4P	Q13434	485 aa	Predicted RBP	13.61	□□□□□ -0.23
MDM2-231	ENST00000544125	FKBP8	Q14318	412 aa		13.55	□□□□□ -0.24
MDM2-231	ENST00000544125	SPDYE4	A6NLX3	237 aa		13.41	□□□□□ -0.26
MDM2-231	ENST00000544125	OSCAR	Q8IYS5	282 aa		13.41	□□□□□ -0.26
MDM2-231	ENST00000544125	ZNF692	Q9BU19	519 aa	Predicted RBP	13.3	□□□□□ -0.28
MDM2-231	ENST00000544125	SPDYE2B	A6NHP3	402 aa		13.29	□□□□□ -0.28
MDM2-231	ENST00000544125	SPDYE6	P0CI01	402 aa		13.29	□□□□□ -0.28
MDM2-231	ENST00000544125	SPDYE2	Q495Y8	402 aa		13.29	□□□□□ -0.28
MDM2-231	ENST00000544125	RBM42	Q9BTD8	480 aa	Known RBP	13.21	□□□□□ -0.29
MDM2-231	ENST00000544125	SSUH2	Q9Y2M2	353 aa		13.18	□□□□□ -0.3
MDM2-231	ENST00000544125	PROM2	Q8N271	834 aa		13.13	□□□□□ -0.31
MDM2-231	ENST00000544125	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
MDM2-231	ENST00000544125	AKT1S1	Q96B36	256 aa		13.06	□□□□□ -0.32
MDM2-231	ENST00000544125	FBXO3	Q9UK99	471 aa		13.04	□□□□□ -0.32
MDM2-231	ENST00000544125	REM2	Q8IYK8	340 aa	Predicted RBP	12.93	□□□□□ -0.34
MDM2-231	ENST00000544125	STAG3	Q9UJ98	1225 aa		12.93	□□□□□ -0.34
MDM2-231	ENST00000544125	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.9	□□□□□ -0.34
MDM2-231	ENST00000544125	CLEC11A	Q9Y240	323 aa		12.87	□□□□□ -0.35
MDM2-231	ENST00000544125	VASP	P50552	380 aa	Predicted RBP	12.83	□□□□□ -0.36
MDM2-231	ENST00000544125	PITPNM1	O00562	1244 aa		12.77	□□□□□ -0.37
MDM2-231	ENST00000544125	PRR29	P0C7W0	189 aa		12.76	□□□□□ -0.37
MDM2-231	ENST00000544125	MIER1	Q8N108	512 aa		12.74	□□□□□ -0.37
MDM2-231	ENST00000544125	PLCD3	Q8N3E9	789 aa		12.74	□□□□□ -0.37
MDM2-231	ENST00000544125	PLEKHG5	O94827	1062 aa		12.69	□□□□□ -0.38
MDM2-231	ENST00000544125	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.66	□□□□□ -0.38
MDM2-231	ENST00000544125	KLHL34	Q8N239	644 aa		12.65	□□□□□ -0.38
MDM2-231	ENST00000544125	CHRDL2	Q6WN34	429 aa		12.6	□□□□□ -0.39
MDM2-231	ENST00000544125	CREBZF	Q9NS37	354 aa		12.57	□□□□□ -0.4
MDM2-231	ENST00000544125	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.57	□□□□□ -0.4
MDM2-231	ENST00000544125	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.55	□□□□□ -0.4
MDM2-231	ENST00000544125	SPOCK2	Q92563	424 aa		12.52	□□□□□ -0.41
MDM2-231	ENST00000544125	CHADL	Q6NUI6	762 aa		12.51	□□□□□ -0.41
MDM2-231	ENST00000544125	FXR2	P51116	673 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
MDM2-231	ENST00000544125	PRKAR2A	P13861	404 aa	Known RBP	12.49	□□□□□ -0.41
MDM2-231	ENST00000544125	RTN4	Q9NQC3	1192 aa	Known RBP	12.49	□□□□□ -0.41
MDM2-231	ENST00000544125	PIP4P2	Q8N4L2	257 aa		12.46	□□□□□ -0.41
MDM2-231	ENST00000544125	NPM1	P06748	294 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
MDM2-231	ENST00000544125	MNX1	P50219	401 aa	Predicted RBP	12.42	□□□□□ -0.42
MDM2-231	ENST00000544125	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.4	□□□□□ -0.42
MDM2-231	ENST00000544125	NUBP1	P53384	320 aa		12.34	□□□□□ -0.43
MDM2-231	ENST00000544125	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.34	□□□□□ -0.43
MDM2-231	ENST00000544125	DCAF8	Q5TAQ9	597 aa		12.3	□□□□□ -0.44
MDM2-231	ENST00000544125	GSE1	Q14687	1217 aa		12.28	□□□□□ -0.44
MDM2-231	ENST00000544125	FAM212A	Q96EL1	285 aa		12.28	□□□□□ -0.44
MDM2-231	ENST00000544125	PKD2	Q13563	968 aa		12.27	□□□□□ -0.45
MDM2-231	ENST00000544125	RASEF	Q8IZ41	740 aa		12.27	□□□□□ -0.45
MDM2-231	ENST00000544125	ECM2	O94769	699 aa	Predicted RBP	12.22	□□□□□ -0.45
MDM2-231	ENST00000544125	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.22	□□□□□ -0.45
MDM2-231	ENST00000544125	PAK3	O75914	559 aa	Predicted RBP	12.19	□□□□□ -0.46
MDM2-231	ENST00000544125	TRIM41	Q8WV44	630 aa		12.17	□□□□□ -0.46

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