RNA–Protein interactions for RNA: ENST00000544102.1

VNN3-213, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-213ENST00000544102 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
VNN3-213ENST00000544102 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
VNN3-213ENST00000544102 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
VNN3-213ENST00000544102 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
VNN3-213ENST00000544102 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
VNN3-213ENST00000544102 FOXD1Q16676 465 aa14.89□□□□□ -0.03
VNN3-213ENST00000544102 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
VNN3-213ENST00000544102 ADRA2BP18089 450 aa14.4□□□□□ -0.1
VNN3-213ENST00000544102 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
VNN3-213ENST00000544102 MSH5O43196 834 aa13.67□□□□□ -0.22
VNN3-213ENST00000544102 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
VNN3-213ENST00000544102 KCNA4P22459 653 aa13.24□□□□□ -0.29
VNN3-213ENST00000544102 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
VNN3-213ENST00000544102 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
VNN3-213ENST00000544102 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
VNN3-213ENST00000544102 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
VNN3-213ENST00000544102 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
VNN3-213ENST00000544102 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
VNN3-213ENST00000544102 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
VNN3-213ENST00000544102 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
VNN3-213ENST00000544102 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
VNN3-213ENST00000544102 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
VNN3-213ENST00000544102 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
VNN3-213ENST00000544102 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
VNN3-213ENST00000544102 ZBTB22O15209 634 aa12.2□□□□□ -0.46
VNN3-213ENST00000544102 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
VNN3-213ENST00000544102 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
VNN3-213ENST00000544102 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
VNN3-213ENST00000544102 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
VNN3-213ENST00000544102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.49
VNN3-213ENST00000544102 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
VNN3-213ENST00000544102 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
VNN3-213ENST00000544102 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
VNN3-213ENST00000544102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
VNN3-213ENST00000544102 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
VNN3-213ENST00000544102 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
VNN3-213ENST00000544102 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
VNN3-213ENST00000544102 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
VNN3-213ENST00000544102 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
VNN3-213ENST00000544102 APLP2Q06481 763 aa11.58□□□□□ -0.56
VNN3-213ENST00000544102 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
VNN3-213ENST00000544102 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
VNN3-213ENST00000544102 CAPN15O75808 1086 aa11.38□□□□□ -0.59
VNN3-213ENST00000544102 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
VNN3-213ENST00000544102 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
VNN3-213ENST00000544102 POLA2Q14181 598 aa11.23□□□□□ -0.61
VNN3-213ENST00000544102 DSG3P32926 999 aa11.21□□□□□ -0.61
VNN3-213ENST00000544102 ABCB7O75027 752 aa11.18□□□□□ -0.62
VNN3-213ENST00000544102 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
VNN3-213ENST00000544102 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
VNN3-213ENST00000544102 FBLN2P98095 1184 aa11.07□□□□□ -0.64
VNN3-213ENST00000544102 FKBP8Q14318 412 aa11.02□□□□□ -0.65
VNN3-213ENST00000544102 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
VNN3-213ENST00000544102 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
VNN3-213ENST00000544102 PROM2Q8N271 834 aa10.81□□□□□ -0.68
VNN3-213ENST00000544102 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
VNN3-213ENST00000544102 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
VNN3-213ENST00000544102 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
VNN3-213ENST00000544102 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
VNN3-213ENST00000544102 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
VNN3-213ENST00000544102 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
VNN3-213ENST00000544102 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
VNN3-213ENST00000544102 FBXO3Q9UK99 471 aa10.61□□□□□ -0.71
VNN3-213ENST00000544102 AKT1S1Q96B36 256 aa10.58□□□□□ -0.72
VNN3-213ENST00000544102 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
VNN3-213ENST00000544102 VASPP50552 380 aaPredicted RBP10.47□□□□□ -0.73
VNN3-213ENST00000544102 REM2Q8IYK8 340 aaPredicted RBP10.46□□□□□ -0.73
VNN3-213ENST00000544102 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
VNN3-213ENST00000544102 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
VNN3-213ENST00000544102 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
VNN3-213ENST00000544102 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
VNN3-213ENST00000544102 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
VNN3-213ENST00000544102 MIER1Q8N108 512 aa10.29□□□□□ -0.76
VNN3-213ENST00000544102 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
VNN3-213ENST00000544102 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
VNN3-213ENST00000544102 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
VNN3-213ENST00000544102 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
VNN3-213ENST00000544102 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
VNN3-213ENST00000544102 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
VNN3-213ENST00000544102 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
VNN3-213ENST00000544102 SPOCK2Q92563 424 aa10.18□□□□□ -0.78
VNN3-213ENST00000544102 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
VNN3-213ENST00000544102 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
VNN3-213ENST00000544102 FXR2P51116 673 aaKnown RBP eCLIP10.15□□□□□ -0.78
VNN3-213ENST00000544102 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
VNN3-213ENST00000544102 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
VNN3-213ENST00000544102 NUBP1P53384 320 aa10.07□□□□□ -0.8
VNN3-213ENST00000544102 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
VNN3-213ENST00000544102 PKD2Q13563 968 aa10.05□□□□□ -0.8
VNN3-213ENST00000544102 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
VNN3-213ENST00000544102 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
VNN3-213ENST00000544102 GSE1Q14687 1217 aa9.97□□□□□ -0.81
VNN3-213ENST00000544102 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
VNN3-213ENST00000544102 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
VNN3-213ENST00000544102 FAM212AQ96EL1 285 aa9.95□□□□□ -0.82
VNN3-213ENST00000544102 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
VNN3-213ENST00000544102 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
VNN3-213ENST00000544102 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
VNN3-213ENST00000544102 RGL2O15211 777 aa9.85□□□□□ -0.83
VNN3-213ENST00000544102 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 292.1 ms