RNA–Protein interactions for RNA: ENST00000543932.5

GTF2H1-215, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 5

Gene GTF2H1, Length 1,251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-215ENST00000543932 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
GTF2H1-215ENST00000543932 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
GTF2H1-215ENST00000543932 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
GTF2H1-215ENST00000543932 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
GTF2H1-215ENST00000543932 FOXD1Q16676 465 aa23.41■■□□□ 1.34
GTF2H1-215ENST00000543932 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
GTF2H1-215ENST00000543932 PPP6R1Q9UPN7 881 aa22.03■■□□□ 1.12
GTF2H1-215ENST00000543932 ADRA2BP18089 450 aa21.93■■□□□ 1.1
GTF2H1-215ENST00000543932 PIAS4Q8N2W9 510 aaPredicted RBP21.85■■□□□ 1.09
GTF2H1-215ENST00000543932 MSH5O43196 834 aa21.75■■□□□ 1.07
GTF2H1-215ENST00000543932 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
GTF2H1-215ENST00000543932 MAPK8IP2Q13387 824 aaPredicted RBP20.13■□□□□ 0.81
GTF2H1-215ENST00000543932 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
GTF2H1-215ENST00000543932 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
GTF2H1-215ENST00000543932 PPP4R3CPQ6ZMV5 832 aa19.71■□□□□ 0.75
GTF2H1-215ENST00000543932 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
GTF2H1-215ENST00000543932 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
GTF2H1-215ENST00000543932 RNF216Q9NWF9 866 aaPredicted RBP19.08■□□□□ 0.64
GTF2H1-215ENST00000543932 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
GTF2H1-215ENST00000543932 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
GTF2H1-215ENST00000543932 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
GTF2H1-215ENST00000543932 RNF39Q9H2S5 420 aa18.65■□□□□ 0.58
GTF2H1-215ENST00000543932 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
GTF2H1-215ENST00000543932 KCNA4P22459 653 aa18.52■□□□□ 0.56
GTF2H1-215ENST00000543932 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
GTF2H1-215ENST00000543932 C1QBPQ07021 282 aaKnown RBP18.3■□□□□ 0.52
GTF2H1-215ENST00000543932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
GTF2H1-215ENST00000543932 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
GTF2H1-215ENST00000543932 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
GTF2H1-215ENST00000543932 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
GTF2H1-215ENST00000543932 CAPN15O75808 1086 aa17.57■□□□□ 0.4
GTF2H1-215ENST00000543932 DSG3P32926 999 aa17.5■□□□□ 0.39
GTF2H1-215ENST00000543932 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
GTF2H1-215ENST00000543932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
GTF2H1-215ENST00000543932 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
GTF2H1-215ENST00000543932 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
GTF2H1-215ENST00000543932 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
GTF2H1-215ENST00000543932 APLP2Q06481 763 aa17.28■□□□□ 0.36
GTF2H1-215ENST00000543932 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
GTF2H1-215ENST00000543932 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
GTF2H1-215ENST00000543932 ABCB7O75027 752 aa17.25■□□□□ 0.35
GTF2H1-215ENST00000543932 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
GTF2H1-215ENST00000543932 ZBTB22O15209 634 aa17.1■□□□□ 0.33
GTF2H1-215ENST00000543932 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
GTF2H1-215ENST00000543932 POLA2Q14181 598 aa16.9■□□□□ 0.3
GTF2H1-215ENST00000543932 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
GTF2H1-215ENST00000543932 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
GTF2H1-215ENST00000543932 POTEHQ6S545 545 aa16.56■□□□□ 0.24
GTF2H1-215ENST00000543932 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
GTF2H1-215ENST00000543932 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
GTF2H1-215ENST00000543932 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
GTF2H1-215ENST00000543932 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
GTF2H1-215ENST00000543932 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
GTF2H1-215ENST00000543932 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
GTF2H1-215ENST00000543932 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
GTF2H1-215ENST00000543932 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
GTF2H1-215ENST00000543932 FBLN2P98095 1184 aa16.13■□□□□ 0.17
GTF2H1-215ENST00000543932 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
GTF2H1-215ENST00000543932 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
GTF2H1-215ENST00000543932 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
GTF2H1-215ENST00000543932 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
GTF2H1-215ENST00000543932 PIP4P2Q8N4L2 257 aa15.92■□□□□ 0.14
GTF2H1-215ENST00000543932 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
GTF2H1-215ENST00000543932 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
GTF2H1-215ENST00000543932 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
GTF2H1-215ENST00000543932 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
GTF2H1-215ENST00000543932 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
GTF2H1-215ENST00000543932 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
GTF2H1-215ENST00000543932 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
GTF2H1-215ENST00000543932 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
GTF2H1-215ENST00000543932 HAX1O00165 279 aa15.53■□□□□ 0.08
GTF2H1-215ENST00000543932 EVX2Q03828 476 aa15.5■□□□□ 0.07
GTF2H1-215ENST00000543932 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
GTF2H1-215ENST00000543932 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
GTF2H1-215ENST00000543932 SPDYE4A6NLX3 237 aa15.39■□□□□ 0.05
GTF2H1-215ENST00000543932 C19orf67A6NJJ6 358 aa15.33■□□□□ 0.04
GTF2H1-215ENST00000543932 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
GTF2H1-215ENST00000543932 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
GTF2H1-215ENST00000543932 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
GTF2H1-215ENST00000543932 PROM2Q8N271 834 aa15.11■□□□□ 0.01
GTF2H1-215ENST00000543932 GABBR2O75899 941 aa15.07■□□□□ 0
GTF2H1-215ENST00000543932 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
GTF2H1-215ENST00000543932 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
GTF2H1-215ENST00000543932 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
GTF2H1-215ENST00000543932 ZNF579Q8NAF0 562 aaKnown RBP14.86□□□□□ -0.03
GTF2H1-215ENST00000543932 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
GTF2H1-215ENST00000543932 FKBP8Q14318 412 aa14.77□□□□□ -0.05
GTF2H1-215ENST00000543932 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
GTF2H1-215ENST00000543932 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
GTF2H1-215ENST00000543932 GALR2O43603 387 aaPredicted RBP14.72□□□□□ -0.05
GTF2H1-215ENST00000543932 CLCN6P51797 869 aa14.71□□□□□ -0.05
GTF2H1-215ENST00000543932 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
GTF2H1-215ENST00000543932 MIER1Q8N108 512 aa14.63□□□□□ -0.07
GTF2H1-215ENST00000543932 DCBLD2Q96PD2 775 aa14.6□□□□□ -0.07
GTF2H1-215ENST00000543932 LHX8Q68G74 356 aa14.59□□□□□ -0.07
GTF2H1-215ENST00000543932 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
GTF2H1-215ENST00000543932 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
GTF2H1-215ENST00000543932 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
GTF2H1-215ENST00000543932 MS4A3Q96HJ5 214 aa14.54□□□□□ -0.08
GTF2H1-215ENST00000543932 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms