RNA–Protein interactions for RNA: ENST00000543888.1

C2CD5-217, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 4

Gene C2CD5, Length 572 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-217ENST00000543888 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
C2CD5-217ENST00000543888 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
C2CD5-217ENST00000543888 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
C2CD5-217ENST00000543888 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
C2CD5-217ENST00000543888 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
C2CD5-217ENST00000543888 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
C2CD5-217ENST00000543888 FOXD1Q16676 465 aa13.45□□□□□ -0.26
C2CD5-217ENST00000543888 ADRA2BP18089 450 aa13.34□□□□□ -0.27
C2CD5-217ENST00000543888 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
C2CD5-217ENST00000543888 KCNA4P22459 653 aa12.82□□□□□ -0.36
C2CD5-217ENST00000543888 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
C2CD5-217ENST00000543888 MSH5O43196 834 aa12.77□□□□□ -0.37
C2CD5-217ENST00000543888 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
C2CD5-217ENST00000543888 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
C2CD5-217ENST00000543888 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
C2CD5-217ENST00000543888 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
C2CD5-217ENST00000543888 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
C2CD5-217ENST00000543888 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
C2CD5-217ENST00000543888 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
C2CD5-217ENST00000543888 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
C2CD5-217ENST00000543888 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
C2CD5-217ENST00000543888 ZBTB22O15209 634 aa11.78□□□□□ -0.52
C2CD5-217ENST00000543888 RNF216Q9NWF9 866 aaPredicted RBP11.77□□□□□ -0.53
C2CD5-217ENST00000543888 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
C2CD5-217ENST00000543888 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
C2CD5-217ENST00000543888 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
C2CD5-217ENST00000543888 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
C2CD5-217ENST00000543888 CACNB1Q02641 598 aaPredicted RBP11.49□□□□□ -0.57
C2CD5-217ENST00000543888 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
C2CD5-217ENST00000543888 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
C2CD5-217ENST00000543888 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
C2CD5-217ENST00000543888 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
C2CD5-217ENST00000543888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.63
C2CD5-217ENST00000543888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.65
C2CD5-217ENST00000543888 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
C2CD5-217ENST00000543888 SAMD1Q6SPF0 538 aaPredicted RBP10.95□□□□□ -0.66
C2CD5-217ENST00000543888 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
C2CD5-217ENST00000543888 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
C2CD5-217ENST00000543888 FKBP8Q14318 412 aa10.93□□□□□ -0.66
C2CD5-217ENST00000543888 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
C2CD5-217ENST00000543888 APLP2Q06481 763 aa10.75□□□□□ -0.69
C2CD5-217ENST00000543888 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
C2CD5-217ENST00000543888 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
C2CD5-217ENST00000543888 ZNF219Q9P2Y4 722 aaPredicted RBP10.72□□□□□ -0.69
C2CD5-217ENST00000543888 POTEHQ6S545 545 aa10.69□□□□□ -0.7
C2CD5-217ENST00000543888 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
C2CD5-217ENST00000543888 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
C2CD5-217ENST00000543888 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
C2CD5-217ENST00000543888 CAPN15O75808 1086 aa10.49□□□□□ -0.73
C2CD5-217ENST00000543888 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
C2CD5-217ENST00000543888 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
C2CD5-217ENST00000543888 FBLN2P98095 1184 aa10.47□□□□□ -0.73
C2CD5-217ENST00000543888 POLA2Q14181 598 aa10.46□□□□□ -0.73
C2CD5-217ENST00000543888 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
C2CD5-217ENST00000543888 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
C2CD5-217ENST00000543888 ABCB7O75027 752 aa10.34□□□□□ -0.75
C2CD5-217ENST00000543888 PROM2Q8N271 834 aa10.31□□□□□ -0.76
C2CD5-217ENST00000543888 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
C2CD5-217ENST00000543888 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
C2CD5-217ENST00000543888 DSG3P32926 999 aa10.17□□□□□ -0.78
C2CD5-217ENST00000543888 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
C2CD5-217ENST00000543888 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
C2CD5-217ENST00000543888 OSCARQ8IYS5 282 aa10.08□□□□□ -0.8
C2CD5-217ENST00000543888 SPDYE2BA6NHP3 402 aa10.06□□□□□ -0.8
C2CD5-217ENST00000543888 SPDYE6P0CI01 402 aa10.06□□□□□ -0.8
C2CD5-217ENST00000543888 SPDYE2Q495Y8 402 aa10.06□□□□□ -0.8
C2CD5-217ENST00000543888 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
C2CD5-217ENST00000543888 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
C2CD5-217ENST00000543888 SSUH2Q9Y2M2 353 aa10.01□□□□□ -0.81
C2CD5-217ENST00000543888 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.81
C2CD5-217ENST00000543888 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
C2CD5-217ENST00000543888 PKD2Q13563 968 aa9.96□□□□□ -0.82
C2CD5-217ENST00000543888 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
C2CD5-217ENST00000543888 SPOCK2Q92563 424 aa9.96□□□□□ -0.82
C2CD5-217ENST00000543888 MIER1Q8N108 512 aa9.92□□□□□ -0.82
C2CD5-217ENST00000543888 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
C2CD5-217ENST00000543888 ECM2O94769 699 aaPredicted RBP9.87□□□□□ -0.83
C2CD5-217ENST00000543888 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
C2CD5-217ENST00000543888 HAP1P54257 671 aaPredicted RBP9.81□□□□□ -0.84
C2CD5-217ENST00000543888 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
C2CD5-217ENST00000543888 CIZ1Q9ULV3 898 aaPredicted RBP9.77□□□□□ -0.85
C2CD5-217ENST00000543888 RGL2O15211 777 aa9.73□□□□□ -0.85
C2CD5-217ENST00000543888 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.73□□□□□ -0.85
C2CD5-217ENST00000543888 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.86
C2CD5-217ENST00000543888 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
C2CD5-217ENST00000543888 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
C2CD5-217ENST00000543888 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
C2CD5-217ENST00000543888 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
C2CD5-217ENST00000543888 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
C2CD5-217ENST00000543888 SP7Q8TDD2 431 aaPredicted RBP9.65□□□□□ -0.86
C2CD5-217ENST00000543888 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
C2CD5-217ENST00000543888 CLEC11AQ9Y240 323 aa9.65□□□□□ -0.86
C2CD5-217ENST00000543888 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
C2CD5-217ENST00000543888 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
C2CD5-217ENST00000543888 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
C2CD5-217ENST00000543888 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
C2CD5-217ENST00000543888 GSE1Q14687 1217 aa9.6□□□□□ -0.87
C2CD5-217ENST00000543888 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
C2CD5-217ENST00000543888 CHRDL2Q6WN34 429 aa9.58□□□□□ -0.88
C2CD5-217ENST00000543888 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms