RNA–Protein interactions for RNA: ENST00000542991.1

ATF7IP-220, Transcript of activating transcription factor 7 interacting protein, humanhuman

TSL 4

Gene ATF7IP, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7IP-220ENST00000542991 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
ATF7IP-220ENST00000542991 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
ATF7IP-220ENST00000542991 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
ATF7IP-220ENST00000542991 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
ATF7IP-220ENST00000542991 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
ATF7IP-220ENST00000542991 FOXD1Q16676 465 aa19.93■□□□□ 0.78
ATF7IP-220ENST00000542991 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
ATF7IP-220ENST00000542991 ADRA2BP18089 450 aa19.3■□□□□ 0.68
ATF7IP-220ENST00000542991 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
ATF7IP-220ENST00000542991 MSH5O43196 834 aa18.2■□□□□ 0.5
ATF7IP-220ENST00000542991 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
ATF7IP-220ENST00000542991 KCNA4P22459 653 aa17.61■□□□□ 0.41
ATF7IP-220ENST00000542991 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
ATF7IP-220ENST00000542991 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
ATF7IP-220ENST00000542991 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
ATF7IP-220ENST00000542991 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
ATF7IP-220ENST00000542991 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
ATF7IP-220ENST00000542991 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
ATF7IP-220ENST00000542991 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
ATF7IP-220ENST00000542991 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
ATF7IP-220ENST00000542991 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
ATF7IP-220ENST00000542991 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
ATF7IP-220ENST00000542991 POTEDQ86YR6 584 aa16.48■□□□□ 0.23
ATF7IP-220ENST00000542991 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
ATF7IP-220ENST00000542991 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
ATF7IP-220ENST00000542991 ZBTB22O15209 634 aa16.28■□□□□ 0.2
ATF7IP-220ENST00000542991 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
ATF7IP-220ENST00000542991 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
ATF7IP-220ENST00000542991 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
ATF7IP-220ENST00000542991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATF7IP-220ENST00000542991 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
ATF7IP-220ENST00000542991 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
ATF7IP-220ENST00000542991 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
ATF7IP-220ENST00000542991 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
ATF7IP-220ENST00000542991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
ATF7IP-220ENST00000542991 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
ATF7IP-220ENST00000542991 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
ATF7IP-220ENST00000542991 ATXN8OSP0DMR3 200 aa15.45■□□□□ 0.06
ATF7IP-220ENST00000542991 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
ATF7IP-220ENST00000542991 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
ATF7IP-220ENST00000542991 APLP2Q06481 763 aa15.25■□□□□ 0.03
ATF7IP-220ENST00000542991 CAPN15O75808 1086 aa15.22■□□□□ 0.03
ATF7IP-220ENST00000542991 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
ATF7IP-220ENST00000542991 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
ATF7IP-220ENST00000542991 ZNF219Q9P2Y4 722 aaPredicted RBP15.14■□□□□ 0.01
ATF7IP-220ENST00000542991 ABCB7O75027 752 aa15.02■□□□□ -0
ATF7IP-220ENST00000542991 DSG3P32926 999 aa14.98□□□□□ -0.01
ATF7IP-220ENST00000542991 POLA2Q14181 598 aa14.98□□□□□ -0.01
ATF7IP-220ENST00000542991 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
ATF7IP-220ENST00000542991 FBLN2P98095 1184 aa14.64□□□□□ -0.07
ATF7IP-220ENST00000542991 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
ATF7IP-220ENST00000542991 FKBP8Q14318 412 aa14.6□□□□□ -0.07
ATF7IP-220ENST00000542991 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
ATF7IP-220ENST00000542991 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
ATF7IP-220ENST00000542991 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
ATF7IP-220ENST00000542991 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
ATF7IP-220ENST00000542991 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
ATF7IP-220ENST00000542991 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
ATF7IP-220ENST00000542991 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
ATF7IP-220ENST00000542991 PROM2Q8N271 834 aa14.26□□□□□ -0.13
ATF7IP-220ENST00000542991 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
ATF7IP-220ENST00000542991 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
ATF7IP-220ENST00000542991 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
ATF7IP-220ENST00000542991 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
ATF7IP-220ENST00000542991 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
ATF7IP-220ENST00000542991 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
ATF7IP-220ENST00000542991 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
ATF7IP-220ENST00000542991 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
ATF7IP-220ENST00000542991 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
ATF7IP-220ENST00000542991 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
ATF7IP-220ENST00000542991 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
ATF7IP-220ENST00000542991 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
ATF7IP-220ENST00000542991 MIER1Q8N108 512 aa13.65□□□□□ -0.22
ATF7IP-220ENST00000542991 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
ATF7IP-220ENST00000542991 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
ATF7IP-220ENST00000542991 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
ATF7IP-220ENST00000542991 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
ATF7IP-220ENST00000542991 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
ATF7IP-220ENST00000542991 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
ATF7IP-220ENST00000542991 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
ATF7IP-220ENST00000542991 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
ATF7IP-220ENST00000542991 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
ATF7IP-220ENST00000542991 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
ATF7IP-220ENST00000542991 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
ATF7IP-220ENST00000542991 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
ATF7IP-220ENST00000542991 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
ATF7IP-220ENST00000542991 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
ATF7IP-220ENST00000542991 NUBP1P53384 320 aa13.36□□□□□ -0.27
ATF7IP-220ENST00000542991 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
ATF7IP-220ENST00000542991 PKD2Q13563 968 aa13.3□□□□□ -0.28
ATF7IP-220ENST00000542991 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
ATF7IP-220ENST00000542991 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATF7IP-220ENST00000542991 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
ATF7IP-220ENST00000542991 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
ATF7IP-220ENST00000542991 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
ATF7IP-220ENST00000542991 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
ATF7IP-220ENST00000542991 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
ATF7IP-220ENST00000542991 GSE1Q14687 1217 aa13.13□□□□□ -0.31
ATF7IP-220ENST00000542991 RGL2O15211 777 aa13.07□□□□□ -0.32
ATF7IP-220ENST00000542991 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms