RNA–Protein interactions for RNA: ENST00000542800.1

C1orf53-203, Transcript of chromosome 1 open reading frame 53, humanhuman

TSL 3

Gene C1orf53, Length 341 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-203ENST00000542800 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
C1orf53-203ENST00000542800 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
C1orf53-203ENST00000542800 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
C1orf53-203ENST00000542800 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
C1orf53-203ENST00000542800 FOXD1Q16676 465 aa17.91■□□□□ 0.46
C1orf53-203ENST00000542800 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
C1orf53-203ENST00000542800 MSH5O43196 834 aa17.03■□□□□ 0.32
C1orf53-203ENST00000542800 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
C1orf53-203ENST00000542800 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
C1orf53-203ENST00000542800 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
C1orf53-203ENST00000542800 ADRA2BP18089 450 aa16.28■□□□□ 0.2
C1orf53-203ENST00000542800 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
C1orf53-203ENST00000542800 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
C1orf53-203ENST00000542800 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
C1orf53-203ENST00000542800 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
C1orf53-203ENST00000542800 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
C1orf53-203ENST00000542800 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
C1orf53-203ENST00000542800 HOXD11P31277 338 aaPredicted RBP14.41□□□□□ -0.1
C1orf53-203ENST00000542800 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
C1orf53-203ENST00000542800 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
C1orf53-203ENST00000542800 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
C1orf53-203ENST00000542800 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
C1orf53-203ENST00000542800 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
C1orf53-203ENST00000542800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
C1orf53-203ENST00000542800 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
C1orf53-203ENST00000542800 POTEHQ6S545 545 aa13.53□□□□□ -0.24
C1orf53-203ENST00000542800 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
C1orf53-203ENST00000542800 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
C1orf53-203ENST00000542800 DSG3P32926 999 aa13.36□□□□□ -0.27
C1orf53-203ENST00000542800 CAPN15O75808 1086 aa13.33□□□□□ -0.28
C1orf53-203ENST00000542800 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
C1orf53-203ENST00000542800 APLP2Q06481 763 aa13.06□□□□□ -0.32
C1orf53-203ENST00000542800 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
C1orf53-203ENST00000542800 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
C1orf53-203ENST00000542800 ABCB7O75027 752 aa12.96□□□□□ -0.33
C1orf53-203ENST00000542800 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
C1orf53-203ENST00000542800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
C1orf53-203ENST00000542800 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
C1orf53-203ENST00000542800 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
C1orf53-203ENST00000542800 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
C1orf53-203ENST00000542800 KCNA4P22459 653 aa12.73□□□□□ -0.37
C1orf53-203ENST00000542800 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
C1orf53-203ENST00000542800 POLA2Q14181 598 aa12.54□□□□□ -0.4
C1orf53-203ENST00000542800 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
C1orf53-203ENST00000542800 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
C1orf53-203ENST00000542800 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
C1orf53-203ENST00000542800 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
C1orf53-203ENST00000542800 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
C1orf53-203ENST00000542800 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
C1orf53-203ENST00000542800 HAX1O00165 279 aa12.18□□□□□ -0.46
C1orf53-203ENST00000542800 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
C1orf53-203ENST00000542800 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
C1orf53-203ENST00000542800 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
C1orf53-203ENST00000542800 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
C1orf53-203ENST00000542800 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
C1orf53-203ENST00000542800 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
C1orf53-203ENST00000542800 EVX2Q03828 476 aa11.93□□□□□ -0.5
C1orf53-203ENST00000542800 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
C1orf53-203ENST00000542800 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
C1orf53-203ENST00000542800 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
C1orf53-203ENST00000542800 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
C1orf53-203ENST00000542800 FBLN2P98095 1184 aa11.8□□□□□ -0.52
C1orf53-203ENST00000542800 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
C1orf53-203ENST00000542800 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
C1orf53-203ENST00000542800 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
C1orf53-203ENST00000542800 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
C1orf53-203ENST00000542800 GABBR2O75899 941 aa11.68□□□□□ -0.54
C1orf53-203ENST00000542800 LHX8Q68G74 356 aa11.68□□□□□ -0.54
C1orf53-203ENST00000542800 ZBTB22O15209 634 aa11.67□□□□□ -0.54
C1orf53-203ENST00000542800 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
C1orf53-203ENST00000542800 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
C1orf53-203ENST00000542800 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
C1orf53-203ENST00000542800 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
C1orf53-203ENST00000542800 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
C1orf53-203ENST00000542800 CLCN6P51797 869 aa11.44□□□□□ -0.58
C1orf53-203ENST00000542800 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
C1orf53-203ENST00000542800 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
C1orf53-203ENST00000542800 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
C1orf53-203ENST00000542800 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
C1orf53-203ENST00000542800 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
C1orf53-203ENST00000542800 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
C1orf53-203ENST00000542800 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
C1orf53-203ENST00000542800 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
C1orf53-203ENST00000542800 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
C1orf53-203ENST00000542800 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
C1orf53-203ENST00000542800 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
C1orf53-203ENST00000542800 STAG3Q9UJ98 1225 aa11.08□□□□□ -0.64
C1orf53-203ENST00000542800 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
C1orf53-203ENST00000542800 POTEMA6NI47 508 aa11.02□□□□□ -0.65
C1orf53-203ENST00000542800 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
C1orf53-203ENST00000542800 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
C1orf53-203ENST00000542800 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
C1orf53-203ENST00000542800 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
C1orf53-203ENST00000542800 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
C1orf53-203ENST00000542800 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
C1orf53-203ENST00000542800 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
C1orf53-203ENST00000542800 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
C1orf53-203ENST00000542800 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
C1orf53-203ENST00000542800 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
C1orf53-203ENST00000542800 C7P10643 843 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms