RNA–Protein interactions for RNA: ENST00000542768.1

C2CD5-214, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 3

Gene C2CD5, Length 611 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-214ENST00000542768 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
C2CD5-214ENST00000542768 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
C2CD5-214ENST00000542768 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
C2CD5-214ENST00000542768 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
C2CD5-214ENST00000542768 FOXD1Q16676 465 aa21.6■■□□□ 1.05
C2CD5-214ENST00000542768 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
C2CD5-214ENST00000542768 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
C2CD5-214ENST00000542768 ADRA2BP18089 450 aa20.4■□□□□ 0.86
C2CD5-214ENST00000542768 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
C2CD5-214ENST00000542768 MSH5O43196 834 aa20.06■□□□□ 0.8
C2CD5-214ENST00000542768 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
C2CD5-214ENST00000542768 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
C2CD5-214ENST00000542768 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
C2CD5-214ENST00000542768 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
C2CD5-214ENST00000542768 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
C2CD5-214ENST00000542768 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
C2CD5-214ENST00000542768 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
C2CD5-214ENST00000542768 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
C2CD5-214ENST00000542768 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
C2CD5-214ENST00000542768 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
C2CD5-214ENST00000542768 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
C2CD5-214ENST00000542768 KCNA4P22459 653 aa17.56■□□□□ 0.4
C2CD5-214ENST00000542768 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
C2CD5-214ENST00000542768 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
C2CD5-214ENST00000542768 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
C2CD5-214ENST00000542768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
C2CD5-214ENST00000542768 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
C2CD5-214ENST00000542768 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
C2CD5-214ENST00000542768 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
C2CD5-214ENST00000542768 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
C2CD5-214ENST00000542768 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
C2CD5-214ENST00000542768 CAPN15O75808 1086 aa16.35■□□□□ 0.21
C2CD5-214ENST00000542768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
C2CD5-214ENST00000542768 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
C2CD5-214ENST00000542768 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
C2CD5-214ENST00000542768 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
C2CD5-214ENST00000542768 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
C2CD5-214ENST00000542768 APLP2Q06481 763 aa16.22■□□□□ 0.19
C2CD5-214ENST00000542768 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
C2CD5-214ENST00000542768 DSG3P32926 999 aa16.18■□□□□ 0.18
C2CD5-214ENST00000542768 ZBTB22O15209 634 aa16.16■□□□□ 0.18
C2CD5-214ENST00000542768 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
C2CD5-214ENST00000542768 ABCB7O75027 752 aa16.03■□□□□ 0.16
C2CD5-214ENST00000542768 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
C2CD5-214ENST00000542768 POLA2Q14181 598 aa15.81■□□□□ 0.12
C2CD5-214ENST00000542768 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
C2CD5-214ENST00000542768 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
C2CD5-214ENST00000542768 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
C2CD5-214ENST00000542768 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
C2CD5-214ENST00000542768 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
C2CD5-214ENST00000542768 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
C2CD5-214ENST00000542768 FBLN2P98095 1184 aa15.22■□□□□ 0.03
C2CD5-214ENST00000542768 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
C2CD5-214ENST00000542768 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
C2CD5-214ENST00000542768 POTEHQ6S545 545 aa15.04■□□□□ -0
C2CD5-214ENST00000542768 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
C2CD5-214ENST00000542768 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
C2CD5-214ENST00000542768 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
C2CD5-214ENST00000542768 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
C2CD5-214ENST00000542768 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
C2CD5-214ENST00000542768 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
C2CD5-214ENST00000542768 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
C2CD5-214ENST00000542768 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
C2CD5-214ENST00000542768 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
C2CD5-214ENST00000542768 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
C2CD5-214ENST00000542768 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
C2CD5-214ENST00000542768 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
C2CD5-214ENST00000542768 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
C2CD5-214ENST00000542768 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
C2CD5-214ENST00000542768 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
C2CD5-214ENST00000542768 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
C2CD5-214ENST00000542768 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
C2CD5-214ENST00000542768 HAX1O00165 279 aa14.36□□□□□ -0.11
C2CD5-214ENST00000542768 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
C2CD5-214ENST00000542768 PROM2Q8N271 834 aa14.26□□□□□ -0.13
C2CD5-214ENST00000542768 EVX2Q03828 476 aa14.23□□□□□ -0.13
C2CD5-214ENST00000542768 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
C2CD5-214ENST00000542768 FKBP8Q14318 412 aa14.19□□□□□ -0.14
C2CD5-214ENST00000542768 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
C2CD5-214ENST00000542768 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
C2CD5-214ENST00000542768 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
C2CD5-214ENST00000542768 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
C2CD5-214ENST00000542768 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
C2CD5-214ENST00000542768 MIER1Q8N108 512 aa13.91□□□□□ -0.18
C2CD5-214ENST00000542768 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
C2CD5-214ENST00000542768 GABBR2O75899 941 aa13.89□□□□□ -0.19
C2CD5-214ENST00000542768 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
C2CD5-214ENST00000542768 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
C2CD5-214ENST00000542768 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
C2CD5-214ENST00000542768 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
C2CD5-214ENST00000542768 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
C2CD5-214ENST00000542768 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
C2CD5-214ENST00000542768 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
C2CD5-214ENST00000542768 CLCN6P51797 869 aa13.71□□□□□ -0.21
C2CD5-214ENST00000542768 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
C2CD5-214ENST00000542768 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
C2CD5-214ENST00000542768 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
C2CD5-214ENST00000542768 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
C2CD5-214ENST00000542768 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
C2CD5-214ENST00000542768 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms