RNA–Protein interactions for RNA: ENST00000541686.5

MDM1-213, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-213ENST00000541686 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
MDM1-213ENST00000541686 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
MDM1-213ENST00000541686 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
MDM1-213ENST00000541686 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
MDM1-213ENST00000541686 FOXD1Q16676 465 aa17.76■□□□□ 0.43
MDM1-213ENST00000541686 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
MDM1-213ENST00000541686 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
MDM1-213ENST00000541686 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
MDM1-213ENST00000541686 MSH5O43196 834 aa16.45■□□□□ 0.22
MDM1-213ENST00000541686 ADRA2BP18089 450 aa16.45■□□□□ 0.22
MDM1-213ENST00000541686 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
MDM1-213ENST00000541686 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
MDM1-213ENST00000541686 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
MDM1-213ENST00000541686 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
MDM1-213ENST00000541686 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
MDM1-213ENST00000541686 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
MDM1-213ENST00000541686 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
MDM1-213ENST00000541686 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
MDM1-213ENST00000541686 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
MDM1-213ENST00000541686 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
MDM1-213ENST00000541686 RNF216Q9NWF9 866 aaPredicted RBP14.12□□□□□ -0.15
MDM1-213ENST00000541686 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
MDM1-213ENST00000541686 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
MDM1-213ENST00000541686 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
MDM1-213ENST00000541686 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
MDM1-213ENST00000541686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.23
MDM1-213ENST00000541686 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
MDM1-213ENST00000541686 KCNA4P22459 653 aa13.36□□□□□ -0.27
MDM1-213ENST00000541686 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
MDM1-213ENST00000541686 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
MDM1-213ENST00000541686 DSG3P32926 999 aa13.22□□□□□ -0.29
MDM1-213ENST00000541686 CAPN15O75808 1086 aa13.2□□□□□ -0.3
MDM1-213ENST00000541686 ABCB7O75027 752 aa12.99□□□□□ -0.33
MDM1-213ENST00000541686 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
MDM1-213ENST00000541686 POTEHQ6S545 545 aa12.92□□□□□ -0.34
MDM1-213ENST00000541686 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
MDM1-213ENST00000541686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
MDM1-213ENST00000541686 APLP2Q06481 763 aa12.67□□□□□ -0.38
MDM1-213ENST00000541686 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
MDM1-213ENST00000541686 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
MDM1-213ENST00000541686 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
MDM1-213ENST00000541686 POLA2Q14181 598 aa12.58□□□□□ -0.4
MDM1-213ENST00000541686 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
MDM1-213ENST00000541686 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
MDM1-213ENST00000541686 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
MDM1-213ENST00000541686 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
MDM1-213ENST00000541686 ZBTB22O15209 634 aa12.37□□□□□ -0.43
MDM1-213ENST00000541686 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
MDM1-213ENST00000541686 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
MDM1-213ENST00000541686 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
MDM1-213ENST00000541686 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
MDM1-213ENST00000541686 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
MDM1-213ENST00000541686 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
MDM1-213ENST00000541686 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
MDM1-213ENST00000541686 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
MDM1-213ENST00000541686 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.5
MDM1-213ENST00000541686 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
MDM1-213ENST00000541686 EVX2Q03828 476 aa11.93□□□□□ -0.5
MDM1-213ENST00000541686 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
MDM1-213ENST00000541686 HAX1O00165 279 aa11.86□□□□□ -0.51
MDM1-213ENST00000541686 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
MDM1-213ENST00000541686 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
MDM1-213ENST00000541686 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
MDM1-213ENST00000541686 FBLN2P98095 1184 aa11.77□□□□□ -0.53
MDM1-213ENST00000541686 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
MDM1-213ENST00000541686 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
MDM1-213ENST00000541686 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
MDM1-213ENST00000541686 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
MDM1-213ENST00000541686 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
MDM1-213ENST00000541686 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
MDM1-213ENST00000541686 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
MDM1-213ENST00000541686 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
MDM1-213ENST00000541686 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
MDM1-213ENST00000541686 GABBR2O75899 941 aa11.49□□□□□ -0.57
MDM1-213ENST00000541686 PRR29P0C7W0 189 aa11.44□□□□□ -0.58
MDM1-213ENST00000541686 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
MDM1-213ENST00000541686 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
MDM1-213ENST00000541686 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
MDM1-213ENST00000541686 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
MDM1-213ENST00000541686 LHX8Q68G74 356 aa11.26□□□□□ -0.61
MDM1-213ENST00000541686 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
MDM1-213ENST00000541686 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
MDM1-213ENST00000541686 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
MDM1-213ENST00000541686 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
MDM1-213ENST00000541686 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
MDM1-213ENST00000541686 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
MDM1-213ENST00000541686 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
MDM1-213ENST00000541686 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
MDM1-213ENST00000541686 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
MDM1-213ENST00000541686 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
MDM1-213ENST00000541686 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
MDM1-213ENST00000541686 CLCN6P51797 869 aa10.91□□□□□ -0.66
MDM1-213ENST00000541686 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
MDM1-213ENST00000541686 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
MDM1-213ENST00000541686 PROM2Q8N271 834 aa10.85□□□□□ -0.67
MDM1-213ENST00000541686 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
MDM1-213ENST00000541686 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
MDM1-213ENST00000541686 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
MDM1-213ENST00000541686 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
MDM1-213ENST00000541686 TRPC6Q9Y210 931 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms