RNA–Protein interactions for RNA: ENST00000541271.1

BHLHE41-203, Transcript of basic helix-loop-helix family member e41, humanhuman

TSL 2

Gene BHLHE41, Length 438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41-203ENST00000541271 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
BHLHE41-203ENST00000541271 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
BHLHE41-203ENST00000541271 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
BHLHE41-203ENST00000541271 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
BHLHE41-203ENST00000541271 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
BHLHE41-203ENST00000541271 FOXD1Q16676 465 aa14.83□□□□□ -0.04
BHLHE41-203ENST00000541271 ADRA2BP18089 450 aa14.32□□□□□ -0.12
BHLHE41-203ENST00000541271 PPP6R1Q9UPN7 881 aa14.3□□□□□ -0.12
BHLHE41-203ENST00000541271 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
BHLHE41-203ENST00000541271 MSH5O43196 834 aa13.7□□□□□ -0.22
BHLHE41-203ENST00000541271 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
BHLHE41-203ENST00000541271 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
BHLHE41-203ENST00000541271 KCNA4P22459 653 aa13.05□□□□□ -0.32
BHLHE41-203ENST00000541271 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
BHLHE41-203ENST00000541271 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
BHLHE41-203ENST00000541271 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
BHLHE41-203ENST00000541271 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
BHLHE41-203ENST00000541271 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
BHLHE41-203ENST00000541271 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
BHLHE41-203ENST00000541271 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
BHLHE41-203ENST00000541271 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
BHLHE41-203ENST00000541271 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
BHLHE41-203ENST00000541271 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
BHLHE41-203ENST00000541271 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
BHLHE41-203ENST00000541271 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
BHLHE41-203ENST00000541271 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
BHLHE41-203ENST00000541271 SLC4A2P04920 1241 aa12□□□□□ -0.49
BHLHE41-203ENST00000541271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.49
BHLHE41-203ENST00000541271 ZBTB22O15209 634 aa11.99□□□□□ -0.49
BHLHE41-203ENST00000541271 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
BHLHE41-203ENST00000541271 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
BHLHE41-203ENST00000541271 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
BHLHE41-203ENST00000541271 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
BHLHE41-203ENST00000541271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
BHLHE41-203ENST00000541271 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
BHLHE41-203ENST00000541271 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
BHLHE41-203ENST00000541271 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
BHLHE41-203ENST00000541271 APLP2Q06481 763 aa11.58□□□□□ -0.56
BHLHE41-203ENST00000541271 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
BHLHE41-203ENST00000541271 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
BHLHE41-203ENST00000541271 CAPN15O75808 1086 aa11.43□□□□□ -0.58
BHLHE41-203ENST00000541271 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
BHLHE41-203ENST00000541271 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
BHLHE41-203ENST00000541271 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
BHLHE41-203ENST00000541271 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
BHLHE41-203ENST00000541271 ABCB7O75027 752 aa11.21□□□□□ -0.61
BHLHE41-203ENST00000541271 POLA2Q14181 598 aa11.19□□□□□ -0.62
BHLHE41-203ENST00000541271 DSG3P32926 999 aa11.16□□□□□ -0.62
BHLHE41-203ENST00000541271 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
BHLHE41-203ENST00000541271 FBLN2P98095 1184 aa11.04□□□□□ -0.64
BHLHE41-203ENST00000541271 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
BHLHE41-203ENST00000541271 FKBP8Q14318 412 aa10.87□□□□□ -0.67
BHLHE41-203ENST00000541271 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
BHLHE41-203ENST00000541271 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
BHLHE41-203ENST00000541271 SPDYE2BA6NHP3 402 aa10.72□□□□□ -0.69
BHLHE41-203ENST00000541271 SPDYE6P0CI01 402 aa10.72□□□□□ -0.69
BHLHE41-203ENST00000541271 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
BHLHE41-203ENST00000541271 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
BHLHE41-203ENST00000541271 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
BHLHE41-203ENST00000541271 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
BHLHE41-203ENST00000541271 PROM2Q8N271 834 aa10.57□□□□□ -0.72
BHLHE41-203ENST00000541271 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
BHLHE41-203ENST00000541271 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
BHLHE41-203ENST00000541271 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
BHLHE41-203ENST00000541271 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
BHLHE41-203ENST00000541271 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
BHLHE41-203ENST00000541271 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
BHLHE41-203ENST00000541271 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
BHLHE41-203ENST00000541271 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
BHLHE41-203ENST00000541271 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
BHLHE41-203ENST00000541271 PRR29P0C7W0 189 aa10.27□□□□□ -0.77
BHLHE41-203ENST00000541271 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
BHLHE41-203ENST00000541271 MIER1Q8N108 512 aa10.23□□□□□ -0.77
BHLHE41-203ENST00000541271 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
BHLHE41-203ENST00000541271 CHRDL2Q6WN34 429 aa10.2□□□□□ -0.78
BHLHE41-203ENST00000541271 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
BHLHE41-203ENST00000541271 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
BHLHE41-203ENST00000541271 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
BHLHE41-203ENST00000541271 CREBZFQ9NS37 354 aa10.12□□□□□ -0.79
BHLHE41-203ENST00000541271 FXR2P51116 673 aaKnown RBP eCLIP10.09□□□□□ -0.79
BHLHE41-203ENST00000541271 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
BHLHE41-203ENST00000541271 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
BHLHE41-203ENST00000541271 PIP4P2Q8N4L2 257 aa10.06□□□□□ -0.8
BHLHE41-203ENST00000541271 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
BHLHE41-203ENST00000541271 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
BHLHE41-203ENST00000541271 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
BHLHE41-203ENST00000541271 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
BHLHE41-203ENST00000541271 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
BHLHE41-203ENST00000541271 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
BHLHE41-203ENST00000541271 NUBP1P53384 320 aa9.92□□□□□ -0.82
BHLHE41-203ENST00000541271 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
BHLHE41-203ENST00000541271 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
BHLHE41-203ENST00000541271 RASEFQ8IZ41 740 aa9.88□□□□□ -0.83
BHLHE41-203ENST00000541271 GSE1Q14687 1217 aa9.87□□□□□ -0.83
BHLHE41-203ENST00000541271 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
BHLHE41-203ENST00000541271 PAK3O75914 559 aaPredicted RBP9.85□□□□□ -0.83
BHLHE41-203ENST00000541271 PKD2Q13563 968 aa9.83□□□□□ -0.84
BHLHE41-203ENST00000541271 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
BHLHE41-203ENST00000541271 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
BHLHE41-203ENST00000541271 CD44P16070 742 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms