RNA–Protein interactions for RNA: ENST00000541267.5

NANOG-204, Transcript of Nanog homeobox, humanhuman

TSL 5

Gene NANOG, Length 836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-204ENST00000541267 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
NANOG-204ENST00000541267 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
NANOG-204ENST00000541267 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
NANOG-204ENST00000541267 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
NANOG-204ENST00000541267 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
NANOG-204ENST00000541267 FOXD1Q16676 465 aa14.34□□□□□ -0.11
NANOG-204ENST00000541267 ADRA2BP18089 450 aa14.05□□□□□ -0.16
NANOG-204ENST00000541267 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
NANOG-204ENST00000541267 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
NANOG-204ENST00000541267 KCNA4P22459 653 aa13.22□□□□□ -0.29
NANOG-204ENST00000541267 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
NANOG-204ENST00000541267 MSH5O43196 834 aa13.07□□□□□ -0.32
NANOG-204ENST00000541267 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
NANOG-204ENST00000541267 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
NANOG-204ENST00000541267 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
NANOG-204ENST00000541267 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
NANOG-204ENST00000541267 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
NANOG-204ENST00000541267 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
NANOG-204ENST00000541267 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
NANOG-204ENST00000541267 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
NANOG-204ENST00000541267 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
NANOG-204ENST00000541267 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
NANOG-204ENST00000541267 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
NANOG-204ENST00000541267 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
NANOG-204ENST00000541267 ZBTB22O15209 634 aa12.19□□□□□ -0.46
NANOG-204ENST00000541267 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
NANOG-204ENST00000541267 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
NANOG-204ENST00000541267 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
NANOG-204ENST00000541267 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
NANOG-204ENST00000541267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
NANOG-204ENST00000541267 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
NANOG-204ENST00000541267 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
NANOG-204ENST00000541267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
NANOG-204ENST00000541267 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
NANOG-204ENST00000541267 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
NANOG-204ENST00000541267 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
NANOG-204ENST00000541267 POTEDQ86YR6 584 aa11.39□□□□□ -0.59
NANOG-204ENST00000541267 APLP2Q06481 763 aa11.27□□□□□ -0.61
NANOG-204ENST00000541267 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
NANOG-204ENST00000541267 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
NANOG-204ENST00000541267 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
NANOG-204ENST00000541267 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
NANOG-204ENST00000541267 FKBP8Q14318 412 aa11.12□□□□□ -0.63
NANOG-204ENST00000541267 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
NANOG-204ENST00000541267 CAPN15O75808 1086 aa11.05□□□□□ -0.64
NANOG-204ENST00000541267 POLA2Q14181 598 aa10.98□□□□□ -0.65
NANOG-204ENST00000541267 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
NANOG-204ENST00000541267 ABCB7O75027 752 aa10.89□□□□□ -0.67
NANOG-204ENST00000541267 FBLN2P98095 1184 aa10.89□□□□□ -0.67
NANOG-204ENST00000541267 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
NANOG-204ENST00000541267 DSG3P32926 999 aa10.81□□□□□ -0.68
NANOG-204ENST00000541267 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
NANOG-204ENST00000541267 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
NANOG-204ENST00000541267 PROM2Q8N271 834 aa10.71□□□□□ -0.69
NANOG-204ENST00000541267 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
NANOG-204ENST00000541267 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
NANOG-204ENST00000541267 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
NANOG-204ENST00000541267 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
NANOG-204ENST00000541267 SPDYE2BA6NHP3 402 aa10.54□□□□□ -0.72
NANOG-204ENST00000541267 SPDYE6P0CI01 402 aa10.54□□□□□ -0.72
NANOG-204ENST00000541267 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
NANOG-204ENST00000541267 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
NANOG-204ENST00000541267 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
NANOG-204ENST00000541267 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
NANOG-204ENST00000541267 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
NANOG-204ENST00000541267 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
NANOG-204ENST00000541267 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
NANOG-204ENST00000541267 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
NANOG-204ENST00000541267 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
NANOG-204ENST00000541267 MIER1Q8N108 512 aa10.23□□□□□ -0.77
NANOG-204ENST00000541267 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
NANOG-204ENST00000541267 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
NANOG-204ENST00000541267 SPOCK2Q92563 424 aa10.2□□□□□ -0.78
NANOG-204ENST00000541267 PKD2Q13563 968 aa10.16□□□□□ -0.78
NANOG-204ENST00000541267 SPDYE1Q8NFV5 336 aaPredicted RBP10.15□□□□□ -0.78
NANOG-204ENST00000541267 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
NANOG-204ENST00000541267 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
NANOG-204ENST00000541267 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
NANOG-204ENST00000541267 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
NANOG-204ENST00000541267 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
NANOG-204ENST00000541267 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
NANOG-204ENST00000541267 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
NANOG-204ENST00000541267 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
NANOG-204ENST00000541267 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
NANOG-204ENST00000541267 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
NANOG-204ENST00000541267 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
NANOG-204ENST00000541267 MNX1P50219 401 aaPredicted RBP9.95□□□□□ -0.82
NANOG-204ENST00000541267 NUBP1P53384 320 aa9.95□□□□□ -0.82
NANOG-204ENST00000541267 RGL2O15211 777 aa9.93□□□□□ -0.82
NANOG-204ENST00000541267 GSE1Q14687 1217 aa9.9□□□□□ -0.82
NANOG-204ENST00000541267 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
NANOG-204ENST00000541267 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
NANOG-204ENST00000541267 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
NANOG-204ENST00000541267 NPM1P06748 294 aaKnown RBP eCLIP9.85□□□□□ -0.83
NANOG-204ENST00000541267 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
NANOG-204ENST00000541267 FAM212AQ96EL1 285 aa9.84□□□□□ -0.83
NANOG-204ENST00000541267 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
NANOG-204ENST00000541267 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
NANOG-204ENST00000541267 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
NANOG-204ENST00000541267 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms