RNA–Protein interactions for RNA: ENST00000540440.1

PMFBP1-210, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene PMFBP1, Length 407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-210ENST00000540440 AEBP2Q6ZN18 517 aaPredicted RBP25.86■■□□□ 1.73
PMFBP1-210ENST00000540440 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
PMFBP1-210ENST00000540440 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
PMFBP1-210ENST00000540440 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
PMFBP1-210ENST00000540440 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
PMFBP1-210ENST00000540440 FOXD1Q16676 465 aa20.28■□□□□ 0.84
PMFBP1-210ENST00000540440 ADRA2BP18089 450 aa19.81■□□□□ 0.76
PMFBP1-210ENST00000540440 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
PMFBP1-210ENST00000540440 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
PMFBP1-210ENST00000540440 MSH5O43196 834 aa18.56■□□□□ 0.56
PMFBP1-210ENST00000540440 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
PMFBP1-210ENST00000540440 KCNA4P22459 653 aa18.43■□□□□ 0.54
PMFBP1-210ENST00000540440 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
PMFBP1-210ENST00000540440 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
PMFBP1-210ENST00000540440 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
PMFBP1-210ENST00000540440 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
PMFBP1-210ENST00000540440 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
PMFBP1-210ENST00000540440 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
PMFBP1-210ENST00000540440 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
PMFBP1-210ENST00000540440 DMRT2Q9Y5R5 561 aa17.52■□□□□ 0.4
PMFBP1-210ENST00000540440 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
PMFBP1-210ENST00000540440 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
PMFBP1-210ENST00000540440 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
PMFBP1-210ENST00000540440 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
PMFBP1-210ENST00000540440 ZBTB22O15209 634 aa16.96■□□□□ 0.31
PMFBP1-210ENST00000540440 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
PMFBP1-210ENST00000540440 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
PMFBP1-210ENST00000540440 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
PMFBP1-210ENST00000540440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.24
PMFBP1-210ENST00000540440 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
PMFBP1-210ENST00000540440 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
PMFBP1-210ENST00000540440 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
PMFBP1-210ENST00000540440 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
PMFBP1-210ENST00000540440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
PMFBP1-210ENST00000540440 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
PMFBP1-210ENST00000540440 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
PMFBP1-210ENST00000540440 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
PMFBP1-210ENST00000540440 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
PMFBP1-210ENST00000540440 APLP2Q06481 763 aa15.91■□□□□ 0.14
PMFBP1-210ENST00000540440 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
PMFBP1-210ENST00000540440 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
PMFBP1-210ENST00000540440 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
PMFBP1-210ENST00000540440 CAPN15O75808 1086 aa15.7■□□□□ 0.1
PMFBP1-210ENST00000540440 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
PMFBP1-210ENST00000540440 FKBP8Q14318 412 aa15.51■□□□□ 0.07
PMFBP1-210ENST00000540440 POLA2Q14181 598 aa15.47■□□□□ 0.07
PMFBP1-210ENST00000540440 ABCB7O75027 752 aa15.45■□□□□ 0.06
PMFBP1-210ENST00000540440 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
PMFBP1-210ENST00000540440 FBLN2P98095 1184 aa15.33■□□□□ 0.04
PMFBP1-210ENST00000540440 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
PMFBP1-210ENST00000540440 DSG3P32926 999 aa15.29■□□□□ 0.04
PMFBP1-210ENST00000540440 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
PMFBP1-210ENST00000540440 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
PMFBP1-210ENST00000540440 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
PMFBP1-210ENST00000540440 PROM2Q8N271 834 aa14.86□□□□□ -0.03
PMFBP1-210ENST00000540440 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
PMFBP1-210ENST00000540440 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
PMFBP1-210ENST00000540440 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
PMFBP1-210ENST00000540440 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
PMFBP1-210ENST00000540440 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
PMFBP1-210ENST00000540440 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
PMFBP1-210ENST00000540440 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
PMFBP1-210ENST00000540440 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
PMFBP1-210ENST00000540440 AMER1Q5JTC6 1135 aaPredicted RBP14.65□□□□□ -0.06
PMFBP1-210ENST00000540440 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
PMFBP1-210ENST00000540440 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
PMFBP1-210ENST00000540440 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
PMFBP1-210ENST00000540440 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
PMFBP1-210ENST00000540440 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
PMFBP1-210ENST00000540440 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
PMFBP1-210ENST00000540440 MIER1Q8N108 512 aa14.35□□□□□ -0.11
PMFBP1-210ENST00000540440 KLHL34Q8N239 644 aa14.35□□□□□ -0.11
PMFBP1-210ENST00000540440 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
PMFBP1-210ENST00000540440 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
PMFBP1-210ENST00000540440 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
PMFBP1-210ENST00000540440 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
PMFBP1-210ENST00000540440 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
PMFBP1-210ENST00000540440 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
PMFBP1-210ENST00000540440 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
PMFBP1-210ENST00000540440 ZBTB47Q9UFB7 747 aaPredicted RBP14.15□□□□□ -0.14
PMFBP1-210ENST00000540440 PKD2Q13563 968 aa14.07□□□□□ -0.16
PMFBP1-210ENST00000540440 CREBZFQ9NS37 354 aa14.06□□□□□ -0.16
PMFBP1-210ENST00000540440 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
PMFBP1-210ENST00000540440 CIZ1Q9ULV3 898 aaPredicted RBP14□□□□□ -0.17
PMFBP1-210ENST00000540440 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
PMFBP1-210ENST00000540440 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
PMFBP1-210ENST00000540440 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
PMFBP1-210ENST00000540440 NUBP1P53384 320 aa13.9□□□□□ -0.18
PMFBP1-210ENST00000540440 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
PMFBP1-210ENST00000540440 DCAF8Q5TAQ9 597 aa13.85□□□□□ -0.19
PMFBP1-210ENST00000540440 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
PMFBP1-210ENST00000540440 GSE1Q14687 1217 aa13.84□□□□□ -0.19
PMFBP1-210ENST00000540440 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
PMFBP1-210ENST00000540440 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
PMFBP1-210ENST00000540440 RGL2O15211 777 aa13.81□□□□□ -0.2
PMFBP1-210ENST00000540440 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
PMFBP1-210ENST00000540440 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
PMFBP1-210ENST00000540440 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
PMFBP1-210ENST00000540440 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
PMFBP1-210ENST00000540440 SLC24A1O60721 1099 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms