RNA–Protein interactions for RNA: ENST00000540245.5

C2CD5-209, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 3

Gene C2CD5, Length 425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-209ENST00000540245 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
C2CD5-209ENST00000540245 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
C2CD5-209ENST00000540245 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
C2CD5-209ENST00000540245 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
C2CD5-209ENST00000540245 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
C2CD5-209ENST00000540245 FOXD1Q16676 465 aa18.59■□□□□ 0.57
C2CD5-209ENST00000540245 ADRA2BP18089 450 aa18.11■□□□□ 0.49
C2CD5-209ENST00000540245 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
C2CD5-209ENST00000540245 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
C2CD5-209ENST00000540245 MSH5O43196 834 aa17.15■□□□□ 0.34
C2CD5-209ENST00000540245 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
C2CD5-209ENST00000540245 KCNA4P22459 653 aa16.79■□□□□ 0.28
C2CD5-209ENST00000540245 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
C2CD5-209ENST00000540245 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
C2CD5-209ENST00000540245 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
C2CD5-209ENST00000540245 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
C2CD5-209ENST00000540245 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
C2CD5-209ENST00000540245 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
C2CD5-209ENST00000540245 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
C2CD5-209ENST00000540245 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
C2CD5-209ENST00000540245 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
C2CD5-209ENST00000540245 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
C2CD5-209ENST00000540245 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
C2CD5-209ENST00000540245 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
C2CD5-209ENST00000540245 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
C2CD5-209ENST00000540245 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
C2CD5-209ENST00000540245 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
C2CD5-209ENST00000540245 ZBTB22O15209 634 aa15.38■□□□□ 0.05
C2CD5-209ENST00000540245 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
C2CD5-209ENST00000540245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
C2CD5-209ENST00000540245 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
C2CD5-209ENST00000540245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
C2CD5-209ENST00000540245 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
C2CD5-209ENST00000540245 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
C2CD5-209ENST00000540245 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
C2CD5-209ENST00000540245 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
C2CD5-209ENST00000540245 APLP2Q06481 763 aa14.75□□□□□ -0.05
C2CD5-209ENST00000540245 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
C2CD5-209ENST00000540245 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
C2CD5-209ENST00000540245 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
C2CD5-209ENST00000540245 CAPN15O75808 1086 aa14.47□□□□□ -0.09
C2CD5-209ENST00000540245 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
C2CD5-209ENST00000540245 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
C2CD5-209ENST00000540245 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
C2CD5-209ENST00000540245 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
C2CD5-209ENST00000540245 POLA2Q14181 598 aa14.2□□□□□ -0.14
C2CD5-209ENST00000540245 ABCB7O75027 752 aa14.19□□□□□ -0.14
C2CD5-209ENST00000540245 FKBP8Q14318 412 aa14.15□□□□□ -0.14
C2CD5-209ENST00000540245 FBLN2P98095 1184 aa14.13□□□□□ -0.15
C2CD5-209ENST00000540245 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
C2CD5-209ENST00000540245 DSG3P32926 999 aa14.02□□□□□ -0.17
C2CD5-209ENST00000540245 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
C2CD5-209ENST00000540245 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
C2CD5-209ENST00000540245 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
C2CD5-209ENST00000540245 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
C2CD5-209ENST00000540245 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
C2CD5-209ENST00000540245 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
C2CD5-209ENST00000540245 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
C2CD5-209ENST00000540245 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
C2CD5-209ENST00000540245 PROM2Q8N271 834 aa13.52□□□□□ -0.25
C2CD5-209ENST00000540245 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
C2CD5-209ENST00000540245 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
C2CD5-209ENST00000540245 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
C2CD5-209ENST00000540245 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
C2CD5-209ENST00000540245 AMER1Q5JTC6 1135 aaPredicted RBP13.35□□□□□ -0.27
C2CD5-209ENST00000540245 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
C2CD5-209ENST00000540245 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
C2CD5-209ENST00000540245 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
C2CD5-209ENST00000540245 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
C2CD5-209ENST00000540245 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
C2CD5-209ENST00000540245 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
C2CD5-209ENST00000540245 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
C2CD5-209ENST00000540245 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
C2CD5-209ENST00000540245 MIER1Q8N108 512 aa13.18□□□□□ -0.3
C2CD5-209ENST00000540245 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
C2CD5-209ENST00000540245 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
C2CD5-209ENST00000540245 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
C2CD5-209ENST00000540245 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
C2CD5-209ENST00000540245 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
C2CD5-209ENST00000540245 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
C2CD5-209ENST00000540245 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
C2CD5-209ENST00000540245 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
C2CD5-209ENST00000540245 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
C2CD5-209ENST00000540245 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
C2CD5-209ENST00000540245 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
C2CD5-209ENST00000540245 PKD2Q13563 968 aa12.77□□□□□ -0.37
C2CD5-209ENST00000540245 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
C2CD5-209ENST00000540245 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
C2CD5-209ENST00000540245 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
C2CD5-209ENST00000540245 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
C2CD5-209ENST00000540245 GSE1Q14687 1217 aa12.73□□□□□ -0.37
C2CD5-209ENST00000540245 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
C2CD5-209ENST00000540245 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
C2CD5-209ENST00000540245 NUBP1P53384 320 aa12.68□□□□□ -0.38
C2CD5-209ENST00000540245 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
C2CD5-209ENST00000540245 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
C2CD5-209ENST00000540245 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
C2CD5-209ENST00000540245 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
C2CD5-209ENST00000540245 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
C2CD5-209ENST00000540245 POTEHQ6S545 545 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms