RNA–Protein interactions for RNA: ENST00000540106.5

LMNTD1-208, Transcript of lamin tail domain containing 1, humanhuman

TSL 4

Gene LMNTD1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-208ENST00000540106 AEBP2Q6ZN18 517 aaPredicted RBP29.45■■■□□ 2.31
LMNTD1-208ENST00000540106 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
LMNTD1-208ENST00000540106 SENP3Q9H4L4 574 aaPredicted RBP25.22■■□□□ 1.63
LMNTD1-208ENST00000540106 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
LMNTD1-208ENST00000540106 FOXD1Q16676 465 aa23.56■■□□□ 1.36
LMNTD1-208ENST00000540106 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
LMNTD1-208ENST00000540106 MSH5O43196 834 aa22.24■■□□□ 1.15
LMNTD1-208ENST00000540106 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
LMNTD1-208ENST00000540106 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
LMNTD1-208ENST00000540106 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
LMNTD1-208ENST00000540106 ADRA2BP18089 450 aa21.61■■□□□ 1.05
LMNTD1-208ENST00000540106 MAPK8IP2Q13387 824 aaPredicted RBP19.99■□□□□ 0.79
LMNTD1-208ENST00000540106 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
LMNTD1-208ENST00000540106 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
LMNTD1-208ENST00000540106 CACNB1Q02641 598 aaPredicted RBP19.42■□□□□ 0.7
LMNTD1-208ENST00000540106 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
LMNTD1-208ENST00000540106 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
LMNTD1-208ENST00000540106 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
LMNTD1-208ENST00000540106 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
LMNTD1-208ENST00000540106 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
LMNTD1-208ENST00000540106 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
LMNTD1-208ENST00000540106 C1QBPQ07021 282 aaKnown RBP18.63■□□□□ 0.57
LMNTD1-208ENST00000540106 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
LMNTD1-208ENST00000540106 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
LMNTD1-208ENST00000540106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.5
LMNTD1-208ENST00000540106 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
LMNTD1-208ENST00000540106 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
LMNTD1-208ENST00000540106 CAPN15O75808 1086 aa17.62■□□□□ 0.41
LMNTD1-208ENST00000540106 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
LMNTD1-208ENST00000540106 DSG3P32926 999 aa17.57■□□□□ 0.4
LMNTD1-208ENST00000540106 POTEHQ6S545 545 aa17.56■□□□□ 0.4
LMNTD1-208ENST00000540106 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
LMNTD1-208ENST00000540106 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
LMNTD1-208ENST00000540106 ABCB7O75027 752 aa17.17■□□□□ 0.34
LMNTD1-208ENST00000540106 KCNA4P22459 653 aa17.16■□□□□ 0.34
LMNTD1-208ENST00000540106 APLP2Q06481 763 aa17.16■□□□□ 0.34
LMNTD1-208ENST00000540106 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
LMNTD1-208ENST00000540106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
LMNTD1-208ENST00000540106 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
LMNTD1-208ENST00000540106 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
LMNTD1-208ENST00000540106 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
LMNTD1-208ENST00000540106 POLA2Q14181 598 aa16.64■□□□□ 0.25
LMNTD1-208ENST00000540106 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
LMNTD1-208ENST00000540106 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
LMNTD1-208ENST00000540106 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
LMNTD1-208ENST00000540106 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
LMNTD1-208ENST00000540106 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
LMNTD1-208ENST00000540106 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
LMNTD1-208ENST00000540106 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
LMNTD1-208ENST00000540106 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
LMNTD1-208ENST00000540106 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
LMNTD1-208ENST00000540106 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
LMNTD1-208ENST00000540106 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
LMNTD1-208ENST00000540106 HAX1O00165 279 aa16.01■□□□□ 0.15
LMNTD1-208ENST00000540106 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
LMNTD1-208ENST00000540106 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMNTD1-208ENST00000540106 ZBTB22O15209 634 aa15.74■□□□□ 0.11
LMNTD1-208ENST00000540106 EVX2Q03828 476 aa15.72■□□□□ 0.11
LMNTD1-208ENST00000540106 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
LMNTD1-208ENST00000540106 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
LMNTD1-208ENST00000540106 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
LMNTD1-208ENST00000540106 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
LMNTD1-208ENST00000540106 FBLN2P98095 1184 aa15.67■□□□□ 0.1
LMNTD1-208ENST00000540106 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
LMNTD1-208ENST00000540106 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
LMNTD1-208ENST00000540106 SPDYE1Q8NFV5 336 aaPredicted RBP15.55■□□□□ 0.08
LMNTD1-208ENST00000540106 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
LMNTD1-208ENST00000540106 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
LMNTD1-208ENST00000540106 C19orf67A6NJJ6 358 aa15.42■□□□□ 0.06
LMNTD1-208ENST00000540106 SSUH2Q9Y2M2 353 aa15.4■□□□□ 0.06
LMNTD1-208ENST00000540106 GABBR2O75899 941 aa15.34■□□□□ 0.05
LMNTD1-208ENST00000540106 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
LMNTD1-208ENST00000540106 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
LMNTD1-208ENST00000540106 LHX8Q68G74 356 aa15.24■□□□□ 0.03
LMNTD1-208ENST00000540106 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
LMNTD1-208ENST00000540106 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
LMNTD1-208ENST00000540106 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
LMNTD1-208ENST00000540106 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
LMNTD1-208ENST00000540106 CLCN6P51797 869 aa14.91□□□□□ -0.02
LMNTD1-208ENST00000540106 DCBLD2Q96PD2 775 aa14.88□□□□□ -0.03
LMNTD1-208ENST00000540106 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
LMNTD1-208ENST00000540106 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
LMNTD1-208ENST00000540106 PLSCR2Q9NRY7 297 aa14.72□□□□□ -0.05
LMNTD1-208ENST00000540106 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
LMNTD1-208ENST00000540106 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
LMNTD1-208ENST00000540106 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
LMNTD1-208ENST00000540106 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
LMNTD1-208ENST00000540106 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
LMNTD1-208ENST00000540106 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
LMNTD1-208ENST00000540106 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
LMNTD1-208ENST00000540106 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
LMNTD1-208ENST00000540106 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
LMNTD1-208ENST00000540106 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
LMNTD1-208ENST00000540106 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
LMNTD1-208ENST00000540106 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
LMNTD1-208ENST00000540106 POTEMA6NI47 508 aa14.37□□□□□ -0.11
LMNTD1-208ENST00000540106 MNX1P50219 401 aaPredicted RBP14.37□□□□□ -0.11
LMNTD1-208ENST00000540106 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
LMNTD1-208ENST00000540106 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
LMNTD1-208ENST00000540106 METRNQ9UJH8 293 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms