RNA–Protein interactions for RNA: ENST00000539523.1

LMNTD1-206, Transcript of lamin tail domain containing 1, humanhuman

TSL 3

Gene LMNTD1, Length 454 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-206ENST00000539523 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
LMNTD1-206ENST00000539523 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
LMNTD1-206ENST00000539523 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
LMNTD1-206ENST00000539523 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
LMNTD1-206ENST00000539523 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
LMNTD1-206ENST00000539523 FOXD1Q16676 465 aa20.72■□□□□ 0.91
LMNTD1-206ENST00000539523 ADRA2BP18089 450 aa20.35■□□□□ 0.85
LMNTD1-206ENST00000539523 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
LMNTD1-206ENST00000539523 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
LMNTD1-206ENST00000539523 KCNA4P22459 653 aa19.25■□□□□ 0.67
LMNTD1-206ENST00000539523 PPP4R3CPQ6ZMV5 832 aa19.13■□□□□ 0.65
LMNTD1-206ENST00000539523 MSH5O43196 834 aa18.96■□□□□ 0.63
LMNTD1-206ENST00000539523 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
LMNTD1-206ENST00000539523 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
LMNTD1-206ENST00000539523 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
LMNTD1-206ENST00000539523 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
LMNTD1-206ENST00000539523 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
LMNTD1-206ENST00000539523 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
LMNTD1-206ENST00000539523 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
LMNTD1-206ENST00000539523 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
LMNTD1-206ENST00000539523 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
LMNTD1-206ENST00000539523 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
LMNTD1-206ENST00000539523 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
LMNTD1-206ENST00000539523 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
LMNTD1-206ENST00000539523 ZBTB22O15209 634 aa17.7■□□□□ 0.42
LMNTD1-206ENST00000539523 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
LMNTD1-206ENST00000539523 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
LMNTD1-206ENST00000539523 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
LMNTD1-206ENST00000539523 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
LMNTD1-206ENST00000539523 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
LMNTD1-206ENST00000539523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
LMNTD1-206ENST00000539523 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
LMNTD1-206ENST00000539523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
LMNTD1-206ENST00000539523 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
LMNTD1-206ENST00000539523 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
LMNTD1-206ENST00000539523 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
LMNTD1-206ENST00000539523 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
LMNTD1-206ENST00000539523 APLP2Q06481 763 aa16.48■□□□□ 0.23
LMNTD1-206ENST00000539523 FKBP8Q14318 412 aa16.31■□□□□ 0.2
LMNTD1-206ENST00000539523 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
LMNTD1-206ENST00000539523 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
LMNTD1-206ENST00000539523 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
LMNTD1-206ENST00000539523 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
LMNTD1-206ENST00000539523 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
LMNTD1-206ENST00000539523 CAPN15O75808 1086 aa16.09■□□□□ 0.17
LMNTD1-206ENST00000539523 POLA2Q14181 598 aa15.95■□□□□ 0.14
LMNTD1-206ENST00000539523 FBLN2P98095 1184 aa15.92■□□□□ 0.14
LMNTD1-206ENST00000539523 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
LMNTD1-206ENST00000539523 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
LMNTD1-206ENST00000539523 ABCB7O75027 752 aa15.81■□□□□ 0.12
LMNTD1-206ENST00000539523 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
LMNTD1-206ENST00000539523 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
LMNTD1-206ENST00000539523 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
LMNTD1-206ENST00000539523 DSG3P32926 999 aa15.65■□□□□ 0.1
LMNTD1-206ENST00000539523 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
LMNTD1-206ENST00000539523 PROM2Q8N271 834 aa15.56■□□□□ 0.08
LMNTD1-206ENST00000539523 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
LMNTD1-206ENST00000539523 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
LMNTD1-206ENST00000539523 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
LMNTD1-206ENST00000539523 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
LMNTD1-206ENST00000539523 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
LMNTD1-206ENST00000539523 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
LMNTD1-206ENST00000539523 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
LMNTD1-206ENST00000539523 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
LMNTD1-206ENST00000539523 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMNTD1-206ENST00000539523 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
LMNTD1-206ENST00000539523 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
LMNTD1-206ENST00000539523 SLC24A1O60721 1099 aa15.03■□□□□ -0
LMNTD1-206ENST00000539523 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
LMNTD1-206ENST00000539523 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
LMNTD1-206ENST00000539523 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
LMNTD1-206ENST00000539523 MIER1Q8N108 512 aa14.94□□□□□ -0.02
LMNTD1-206ENST00000539523 SPOCK2Q92563 424 aa14.93□□□□□ -0.02
LMNTD1-206ENST00000539523 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
LMNTD1-206ENST00000539523 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
LMNTD1-206ENST00000539523 PKD2Q13563 968 aa14.83□□□□□ -0.04
LMNTD1-206ENST00000539523 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
LMNTD1-206ENST00000539523 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
LMNTD1-206ENST00000539523 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
LMNTD1-206ENST00000539523 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
LMNTD1-206ENST00000539523 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
LMNTD1-206ENST00000539523 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
LMNTD1-206ENST00000539523 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
LMNTD1-206ENST00000539523 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
LMNTD1-206ENST00000539523 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
LMNTD1-206ENST00000539523 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
LMNTD1-206ENST00000539523 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
LMNTD1-206ENST00000539523 RGL2O15211 777 aa14.51□□□□□ -0.09
LMNTD1-206ENST00000539523 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
LMNTD1-206ENST00000539523 GSE1Q14687 1217 aa14.49□□□□□ -0.09
LMNTD1-206ENST00000539523 NUBP1P53384 320 aa14.46□□□□□ -0.09
LMNTD1-206ENST00000539523 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
LMNTD1-206ENST00000539523 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
LMNTD1-206ENST00000539523 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
LMNTD1-206ENST00000539523 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
LMNTD1-206ENST00000539523 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
LMNTD1-206ENST00000539523 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
LMNTD1-206ENST00000539523 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
LMNTD1-206ENST00000539523 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
LMNTD1-206ENST00000539523 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms