RNA–Protein interactions for RNA: ENST00000539172.5

PMFBP1-209, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 4

Gene PMFBP1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-209ENST00000539172 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
PMFBP1-209ENST00000539172 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
PMFBP1-209ENST00000539172 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
PMFBP1-209ENST00000539172 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
PMFBP1-209ENST00000539172 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
PMFBP1-209ENST00000539172 FOXD1Q16676 465 aa20.11■□□□□ 0.81
PMFBP1-209ENST00000539172 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
PMFBP1-209ENST00000539172 ADRA2BP18089 450 aa19.61■□□□□ 0.73
PMFBP1-209ENST00000539172 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
PMFBP1-209ENST00000539172 MSH5O43196 834 aa18.35■□□□□ 0.53
PMFBP1-209ENST00000539172 PPP4R3CPQ6ZMV5 832 aa18.24■□□□□ 0.51
PMFBP1-209ENST00000539172 KCNA4P22459 653 aa18.19■□□□□ 0.5
PMFBP1-209ENST00000539172 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
PMFBP1-209ENST00000539172 NCBP3Q53F19 620 aaKnown RBP17.77■□□□□ 0.44
PMFBP1-209ENST00000539172 MAPK8IP2Q13387 824 aaPredicted RBP17.73■□□□□ 0.43
PMFBP1-209ENST00000539172 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
PMFBP1-209ENST00000539172 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
PMFBP1-209ENST00000539172 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
PMFBP1-209ENST00000539172 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
PMFBP1-209ENST00000539172 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
PMFBP1-209ENST00000539172 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
PMFBP1-209ENST00000539172 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
PMFBP1-209ENST00000539172 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
PMFBP1-209ENST00000539172 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
PMFBP1-209ENST00000539172 ZBTB22O15209 634 aa16.76■□□□□ 0.27
PMFBP1-209ENST00000539172 DCAF8L1A6NGE4 600 aa16.61■□□□□ 0.25
PMFBP1-209ENST00000539172 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
PMFBP1-209ENST00000539172 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
PMFBP1-209ENST00000539172 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
PMFBP1-209ENST00000539172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
PMFBP1-209ENST00000539172 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
PMFBP1-209ENST00000539172 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
PMFBP1-209ENST00000539172 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
PMFBP1-209ENST00000539172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
PMFBP1-209ENST00000539172 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
PMFBP1-209ENST00000539172 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
PMFBP1-209ENST00000539172 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
PMFBP1-209ENST00000539172 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
PMFBP1-209ENST00000539172 APLP2Q06481 763 aa15.61■□□□□ 0.09
PMFBP1-209ENST00000539172 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
PMFBP1-209ENST00000539172 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
PMFBP1-209ENST00000539172 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
PMFBP1-209ENST00000539172 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
PMFBP1-209ENST00000539172 CAPN15O75808 1086 aa15.47■□□□□ 0.07
PMFBP1-209ENST00000539172 POLA2Q14181 598 aa15.29■□□□□ 0.04
PMFBP1-209ENST00000539172 ABCB7O75027 752 aa15.24■□□□□ 0.03
PMFBP1-209ENST00000539172 FKBP8Q14318 412 aa15.23■□□□□ 0.03
PMFBP1-209ENST00000539172 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
PMFBP1-209ENST00000539172 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
PMFBP1-209ENST00000539172 DSG3P32926 999 aa15.15■□□□□ 0.02
PMFBP1-209ENST00000539172 FBLN2P98095 1184 aa15.05■□□□□ -0
PMFBP1-209ENST00000539172 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
PMFBP1-209ENST00000539172 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
PMFBP1-209ENST00000539172 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
PMFBP1-209ENST00000539172 PROM2Q8N271 834 aa14.68□□□□□ -0.06
PMFBP1-209ENST00000539172 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
PMFBP1-209ENST00000539172 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
PMFBP1-209ENST00000539172 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
PMFBP1-209ENST00000539172 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
PMFBP1-209ENST00000539172 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
PMFBP1-209ENST00000539172 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
PMFBP1-209ENST00000539172 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
PMFBP1-209ENST00000539172 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
PMFBP1-209ENST00000539172 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
PMFBP1-209ENST00000539172 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
PMFBP1-209ENST00000539172 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
PMFBP1-209ENST00000539172 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
PMFBP1-209ENST00000539172 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
PMFBP1-209ENST00000539172 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
PMFBP1-209ENST00000539172 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
PMFBP1-209ENST00000539172 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
PMFBP1-209ENST00000539172 MIER1Q8N108 512 aa14.11□□□□□ -0.15
PMFBP1-209ENST00000539172 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
PMFBP1-209ENST00000539172 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
PMFBP1-209ENST00000539172 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
PMFBP1-209ENST00000539172 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
PMFBP1-209ENST00000539172 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
PMFBP1-209ENST00000539172 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
PMFBP1-209ENST00000539172 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
PMFBP1-209ENST00000539172 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
PMFBP1-209ENST00000539172 PKD2Q13563 968 aa13.87□□□□□ -0.19
PMFBP1-209ENST00000539172 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
PMFBP1-209ENST00000539172 MNX1P50219 401 aaPredicted RBP13.8□□□□□ -0.2
PMFBP1-209ENST00000539172 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
PMFBP1-209ENST00000539172 NUBP1P53384 320 aa13.73□□□□□ -0.21
PMFBP1-209ENST00000539172 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
PMFBP1-209ENST00000539172 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
PMFBP1-209ENST00000539172 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
PMFBP1-209ENST00000539172 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
PMFBP1-209ENST00000539172 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
PMFBP1-209ENST00000539172 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
PMFBP1-209ENST00000539172 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
PMFBP1-209ENST00000539172 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
PMFBP1-209ENST00000539172 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
PMFBP1-209ENST00000539172 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
PMFBP1-209ENST00000539172 GSE1Q14687 1217 aa13.6□□□□□ -0.23
PMFBP1-209ENST00000539172 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
PMFBP1-209ENST00000539172 RGL2O15211 777 aa13.59□□□□□ -0.23
PMFBP1-209ENST00000539172 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
PMFBP1-209ENST00000539172 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms