RNA–Protein interactions for RNA: ENST00000539028.1

CLEC2B-203, Transcript of C-type lectin domain family 2 member B, humanhuman

TSL 1 (best)

Gene CLEC2B, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC2B-203ENST00000539028 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
CLEC2B-203ENST00000539028 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
CLEC2B-203ENST00000539028 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
CLEC2B-203ENST00000539028 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
CLEC2B-203ENST00000539028 FOXD1Q16676 465 aa21.68■■□□□ 1.06
CLEC2B-203ENST00000539028 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
CLEC2B-203ENST00000539028 MSH5O43196 834 aa20.57■□□□□ 0.88
CLEC2B-203ENST00000539028 ADRA2BP18089 450 aa20.49■□□□□ 0.87
CLEC2B-203ENST00000539028 POTEDQ86YR6 584 aa20.48■□□□□ 0.87
CLEC2B-203ENST00000539028 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
CLEC2B-203ENST00000539028 PIAS4Q8N2W9 510 aaPredicted RBP20.41■□□□□ 0.86
CLEC2B-203ENST00000539028 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
CLEC2B-203ENST00000539028 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
CLEC2B-203ENST00000539028 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
CLEC2B-203ENST00000539028 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
CLEC2B-203ENST00000539028 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
CLEC2B-203ENST00000539028 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
CLEC2B-203ENST00000539028 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
CLEC2B-203ENST00000539028 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
CLEC2B-203ENST00000539028 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
CLEC2B-203ENST00000539028 KCNA4P22459 653 aa17.81■□□□□ 0.44
CLEC2B-203ENST00000539028 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
CLEC2B-203ENST00000539028 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
CLEC2B-203ENST00000539028 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
CLEC2B-203ENST00000539028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLEC2B-203ENST00000539028 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
CLEC2B-203ENST00000539028 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
CLEC2B-203ENST00000539028 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
CLEC2B-203ENST00000539028 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
CLEC2B-203ENST00000539028 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
CLEC2B-203ENST00000539028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
CLEC2B-203ENST00000539028 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
CLEC2B-203ENST00000539028 CAPN15O75808 1086 aa16.58■□□□□ 0.24
CLEC2B-203ENST00000539028 APLP2Q06481 763 aa16.58■□□□□ 0.24
CLEC2B-203ENST00000539028 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CLEC2B-203ENST00000539028 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
CLEC2B-203ENST00000539028 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
CLEC2B-203ENST00000539028 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
CLEC2B-203ENST00000539028 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
CLEC2B-203ENST00000539028 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
CLEC2B-203ENST00000539028 ZBTB22O15209 634 aa16.29■□□□□ 0.2
CLEC2B-203ENST00000539028 DSG3P32926 999 aa16.21■□□□□ 0.19
CLEC2B-203ENST00000539028 ABCB7O75027 752 aa16.19■□□□□ 0.18
CLEC2B-203ENST00000539028 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
CLEC2B-203ENST00000539028 POTEHQ6S545 545 aa16.02■□□□□ 0.16
CLEC2B-203ENST00000539028 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
CLEC2B-203ENST00000539028 POLA2Q14181 598 aa15.96■□□□□ 0.15
CLEC2B-203ENST00000539028 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
CLEC2B-203ENST00000539028 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
CLEC2B-203ENST00000539028 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
CLEC2B-203ENST00000539028 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
CLEC2B-203ENST00000539028 FBLN2P98095 1184 aa15.56■□□□□ 0.08
CLEC2B-203ENST00000539028 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
CLEC2B-203ENST00000539028 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
CLEC2B-203ENST00000539028 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
CLEC2B-203ENST00000539028 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
CLEC2B-203ENST00000539028 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
CLEC2B-203ENST00000539028 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
CLEC2B-203ENST00000539028 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
CLEC2B-203ENST00000539028 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
CLEC2B-203ENST00000539028 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
CLEC2B-203ENST00000539028 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
CLEC2B-203ENST00000539028 CLEC11AQ9Y240 323 aa14.95□□□□□ -0.02
CLEC2B-203ENST00000539028 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
CLEC2B-203ENST00000539028 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLEC2B-203ENST00000539028 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
CLEC2B-203ENST00000539028 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
CLEC2B-203ENST00000539028 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
CLEC2B-203ENST00000539028 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
CLEC2B-203ENST00000539028 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
CLEC2B-203ENST00000539028 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
CLEC2B-203ENST00000539028 HAX1O00165 279 aa14.63□□□□□ -0.07
CLEC2B-203ENST00000539028 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
CLEC2B-203ENST00000539028 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
CLEC2B-203ENST00000539028 FKBP8Q14318 412 aa14.59□□□□□ -0.07
CLEC2B-203ENST00000539028 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
CLEC2B-203ENST00000539028 PROM2Q8N271 834 aa14.37□□□□□ -0.11
CLEC2B-203ENST00000539028 EVX2Q03828 476 aa14.32□□□□□ -0.12
CLEC2B-203ENST00000539028 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
CLEC2B-203ENST00000539028 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
CLEC2B-203ENST00000539028 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
CLEC2B-203ENST00000539028 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
CLEC2B-203ENST00000539028 MIER1Q8N108 512 aa14.23□□□□□ -0.13
CLEC2B-203ENST00000539028 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
CLEC2B-203ENST00000539028 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLEC2B-203ENST00000539028 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
CLEC2B-203ENST00000539028 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
CLEC2B-203ENST00000539028 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
CLEC2B-203ENST00000539028 GABBR2O75899 941 aa14.08□□□□□ -0.16
CLEC2B-203ENST00000539028 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
CLEC2B-203ENST00000539028 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
CLEC2B-203ENST00000539028 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
CLEC2B-203ENST00000539028 CLCN6P51797 869 aa13.98□□□□□ -0.17
CLEC2B-203ENST00000539028 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
CLEC2B-203ENST00000539028 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
CLEC2B-203ENST00000539028 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
CLEC2B-203ENST00000539028 LHX8Q68G74 356 aa13.93□□□□□ -0.18
CLEC2B-203ENST00000539028 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
CLEC2B-203ENST00000539028 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
CLEC2B-203ENST00000539028 FAM212AQ96EL1 285 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms