RNA–Protein interactions for RNA: ENST00000538533.5

GTF2H3-205, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-205ENST00000538533 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
GTF2H3-205ENST00000538533 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
GTF2H3-205ENST00000538533 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
GTF2H3-205ENST00000538533 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
GTF2H3-205ENST00000538533 FOXD1Q16676 465 aa17.23■□□□□ 0.35
GTF2H3-205ENST00000538533 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
GTF2H3-205ENST00000538533 MSH5O43196 834 aa16.16■□□□□ 0.18
GTF2H3-205ENST00000538533 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
GTF2H3-205ENST00000538533 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
GTF2H3-205ENST00000538533 ADRA2BP18089 450 aa16.1■□□□□ 0.17
GTF2H3-205ENST00000538533 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
GTF2H3-205ENST00000538533 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
GTF2H3-205ENST00000538533 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
GTF2H3-205ENST00000538533 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
GTF2H3-205ENST00000538533 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
GTF2H3-205ENST00000538533 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
GTF2H3-205ENST00000538533 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
GTF2H3-205ENST00000538533 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
GTF2H3-205ENST00000538533 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
GTF2H3-205ENST00000538533 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
GTF2H3-205ENST00000538533 CACNB1Q02641 598 aaPredicted RBP13.81□□□□□ -0.2
GTF2H3-205ENST00000538533 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
GTF2H3-205ENST00000538533 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
GTF2H3-205ENST00000538533 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
GTF2H3-205ENST00000538533 KCNA4P22459 653 aa13.71□□□□□ -0.21
GTF2H3-205ENST00000538533 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
GTF2H3-205ENST00000538533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
GTF2H3-205ENST00000538533 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
GTF2H3-205ENST00000538533 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
GTF2H3-205ENST00000538533 CAPN15O75808 1086 aa13.01□□□□□ -0.33
GTF2H3-205ENST00000538533 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
GTF2H3-205ENST00000538533 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
GTF2H3-205ENST00000538533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
GTF2H3-205ENST00000538533 APLP2Q06481 763 aa12.95□□□□□ -0.34
GTF2H3-205ENST00000538533 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
GTF2H3-205ENST00000538533 DSG3P32926 999 aa12.91□□□□□ -0.34
GTF2H3-205ENST00000538533 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
GTF2H3-205ENST00000538533 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
GTF2H3-205ENST00000538533 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
GTF2H3-205ENST00000538533 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
GTF2H3-205ENST00000538533 ABCB7O75027 752 aa12.68□□□□□ -0.38
GTF2H3-205ENST00000538533 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
GTF2H3-205ENST00000538533 ZBTB22O15209 634 aa12.65□□□□□ -0.38
GTF2H3-205ENST00000538533 POLA2Q14181 598 aa12.48□□□□□ -0.41
GTF2H3-205ENST00000538533 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
GTF2H3-205ENST00000538533 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
GTF2H3-205ENST00000538533 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
GTF2H3-205ENST00000538533 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
GTF2H3-205ENST00000538533 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
GTF2H3-205ENST00000538533 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
GTF2H3-205ENST00000538533 POTEHQ6S545 545 aa12.27□□□□□ -0.45
GTF2H3-205ENST00000538533 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
GTF2H3-205ENST00000538533 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
GTF2H3-205ENST00000538533 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
GTF2H3-205ENST00000538533 FBLN2P98095 1184 aa12□□□□□ -0.49
GTF2H3-205ENST00000538533 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
GTF2H3-205ENST00000538533 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
GTF2H3-205ENST00000538533 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
GTF2H3-205ENST00000538533 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
GTF2H3-205ENST00000538533 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
GTF2H3-205ENST00000538533 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
GTF2H3-205ENST00000538533 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
GTF2H3-205ENST00000538533 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
GTF2H3-205ENST00000538533 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
GTF2H3-205ENST00000538533 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
GTF2H3-205ENST00000538533 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
GTF2H3-205ENST00000538533 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
GTF2H3-205ENST00000538533 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
GTF2H3-205ENST00000538533 HAX1O00165 279 aa11.54□□□□□ -0.56
GTF2H3-205ENST00000538533 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
GTF2H3-205ENST00000538533 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
GTF2H3-205ENST00000538533 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
GTF2H3-205ENST00000538533 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
GTF2H3-205ENST00000538533 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
GTF2H3-205ENST00000538533 EVX2Q03828 476 aa11.34□□□□□ -0.59
GTF2H3-205ENST00000538533 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
GTF2H3-205ENST00000538533 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
GTF2H3-205ENST00000538533 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
GTF2H3-205ENST00000538533 FKBP8Q14318 412 aa11.19□□□□□ -0.62
GTF2H3-205ENST00000538533 PROM2Q8N271 834 aa11.18□□□□□ -0.62
GTF2H3-205ENST00000538533 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
GTF2H3-205ENST00000538533 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
GTF2H3-205ENST00000538533 GABBR2O75899 941 aa11.13□□□□□ -0.63
GTF2H3-205ENST00000538533 CLCN6P51797 869 aa11.06□□□□□ -0.64
GTF2H3-205ENST00000538533 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
GTF2H3-205ENST00000538533 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
GTF2H3-205ENST00000538533 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
GTF2H3-205ENST00000538533 ZNF579Q8NAF0 562 aaKnown RBP10.98□□□□□ -0.65
GTF2H3-205ENST00000538533 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
GTF2H3-205ENST00000538533 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
GTF2H3-205ENST00000538533 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
GTF2H3-205ENST00000538533 POTEIP0CG38 1075 aa10.86□□□□□ -0.67
GTF2H3-205ENST00000538533 MIER1Q8N108 512 aa10.85□□□□□ -0.67
GTF2H3-205ENST00000538533 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
GTF2H3-205ENST00000538533 LHX8Q68G74 356 aa10.82□□□□□ -0.68
GTF2H3-205ENST00000538533 PHF12Q96QT6 1004 aa10.82□□□□□ -0.68
GTF2H3-205ENST00000538533 FBXO3Q9UK99 471 aa10.79□□□□□ -0.68
GTF2H3-205ENST00000538533 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
GTF2H3-205ENST00000538533 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
GTF2H3-205ENST00000538533 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms