RNA–Protein interactions for RNA: ENST00000538178.5

LMNTD1-205, Transcript of lamin tail domain containing 1, humanhuman

TSL 3

Gene LMNTD1, Length 716 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-205ENST00000538178 AEBP2Q6ZN18 517 aaPredicted RBP31.79■■■□□ 2.68
LMNTD1-205ENST00000538178 CHIC1Q5VXU3 224 aa30.66■■■□□ 2.5
LMNTD1-205ENST00000538178 SENP3Q9H4L4 574 aaPredicted RBP27.08■■□□□ 1.93
LMNTD1-205ENST00000538178 PHF23Q9BUL5 403 aaPredicted RBP26.9■■□□□ 1.9
LMNTD1-205ENST00000538178 FOXD1Q16676 465 aa25.16■■□□□ 1.62
LMNTD1-205ENST00000538178 PLPPR3Q6T4P5 718 aa24.72■■□□□ 1.55
LMNTD1-205ENST00000538178 PPP6R1Q9UPN7 881 aa23.86■■□□□ 1.41
LMNTD1-205ENST00000538178 ADRA2BP18089 450 aa23.81■■□□□ 1.4
LMNTD1-205ENST00000538178 PIAS4Q8N2W9 510 aaPredicted RBP23.61■■□□□ 1.37
LMNTD1-205ENST00000538178 MSH5O43196 834 aa23.39■■□□□ 1.33
LMNTD1-205ENST00000538178 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
LMNTD1-205ENST00000538178 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
LMNTD1-205ENST00000538178 MAPK8IP2Q13387 824 aaPredicted RBP21.72■■□□□ 1.07
LMNTD1-205ENST00000538178 PPP4R3CPQ6ZMV5 832 aa21.7■■□□□ 1.06
LMNTD1-205ENST00000538178 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
LMNTD1-205ENST00000538178 CNKSR2Q8WXI2 1034 aa21.21■□□□□ 0.99
LMNTD1-205ENST00000538178 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
LMNTD1-205ENST00000538178 HOXD11P31277 338 aaPredicted RBP20.94■□□□□ 0.94
LMNTD1-205ENST00000538178 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
LMNTD1-205ENST00000538178 NPM3O75607 178 aaKnown RBP20.71■□□□□ 0.91
LMNTD1-205ENST00000538178 KCNA4P22459 653 aa20.71■□□□□ 0.91
LMNTD1-205ENST00000538178 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.89
LMNTD1-205ENST00000538178 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
LMNTD1-205ENST00000538178 RNF39Q9H2S5 420 aa20■□□□□ 0.79
LMNTD1-205ENST00000538178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.78
LMNTD1-205ENST00000538178 CACNB1Q02641 598 aaPredicted RBP19.75■□□□□ 0.75
LMNTD1-205ENST00000538178 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
LMNTD1-205ENST00000538178 SLC4A2P04920 1241 aa19.66■□□□□ 0.74
LMNTD1-205ENST00000538178 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
LMNTD1-205ENST00000538178 U3KPZ7 1027 aaPredicted RBP19.57■□□□□ 0.72
LMNTD1-205ENST00000538178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
LMNTD1-205ENST00000538178 HNRNPUL2Q1KMD3 747 aaKnown RBP19.21■□□□□ 0.67
LMNTD1-205ENST00000538178 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
LMNTD1-205ENST00000538178 MYCNP04198 464 aaPredicted RBP19.16■□□□□ 0.66
LMNTD1-205ENST00000538178 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
LMNTD1-205ENST00000538178 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
LMNTD1-205ENST00000538178 APLP2Q06481 763 aa19.1■□□□□ 0.65
LMNTD1-205ENST00000538178 CAPN15O75808 1086 aa19.07■□□□□ 0.64
LMNTD1-205ENST00000538178 ZBTB22O15209 634 aa19.04■□□□□ 0.64
LMNTD1-205ENST00000538178 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
LMNTD1-205ENST00000538178 DSG3P32926 999 aa18.88■□□□□ 0.61
LMNTD1-205ENST00000538178 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
LMNTD1-205ENST00000538178 ABCB7O75027 752 aa18.65■□□□□ 0.58
LMNTD1-205ENST00000538178 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
LMNTD1-205ENST00000538178 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
LMNTD1-205ENST00000538178 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
LMNTD1-205ENST00000538178 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
LMNTD1-205ENST00000538178 POLA2Q14181 598 aa18.48■□□□□ 0.55
LMNTD1-205ENST00000538178 ZBTB12Q9Y330 459 aaPredicted RBP18.19■□□□□ 0.5
LMNTD1-205ENST00000538178 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.48
LMNTD1-205ENST00000538178 FBLN2P98095 1184 aa17.91■□□□□ 0.46
LMNTD1-205ENST00000538178 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
LMNTD1-205ENST00000538178 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.44
LMNTD1-205ENST00000538178 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
LMNTD1-205ENST00000538178 SPDYE2BA6NHP3 402 aa17.65■□□□□ 0.42
LMNTD1-205ENST00000538178 SPDYE6P0CI01 402 aa17.65■□□□□ 0.42
LMNTD1-205ENST00000538178 SPDYE2Q495Y8 402 aa17.65■□□□□ 0.42
LMNTD1-205ENST00000538178 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
LMNTD1-205ENST00000538178 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
LMNTD1-205ENST00000538178 SSUH2Q9Y2M2 353 aa17.47■□□□□ 0.39
LMNTD1-205ENST00000538178 CHRDL2Q6WN34 429 aa17.42■□□□□ 0.38
LMNTD1-205ENST00000538178 POTEHQ6S545 545 aa17.35■□□□□ 0.37
LMNTD1-205ENST00000538178 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
LMNTD1-205ENST00000538178 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
LMNTD1-205ENST00000538178 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
LMNTD1-205ENST00000538178 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
LMNTD1-205ENST00000538178 CLEC11AQ9Y240 323 aa17.13■□□□□ 0.33
LMNTD1-205ENST00000538178 PIP4P2Q8N4L2 257 aa17.1■□□□□ 0.33
LMNTD1-205ENST00000538178 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
LMNTD1-205ENST00000538178 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
LMNTD1-205ENST00000538178 PROM2Q8N271 834 aa16.92■□□□□ 0.3
LMNTD1-205ENST00000538178 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
LMNTD1-205ENST00000538178 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
LMNTD1-205ENST00000538178 FKBP8Q14318 412 aa16.82■□□□□ 0.28
LMNTD1-205ENST00000538178 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
LMNTD1-205ENST00000538178 HAX1O00165 279 aa16.65■□□□□ 0.26
LMNTD1-205ENST00000538178 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
LMNTD1-205ENST00000538178 FARP1Q9Y4F1 1045 aaPredicted RBP16.59■□□□□ 0.25
LMNTD1-205ENST00000538178 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
LMNTD1-205ENST00000538178 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
LMNTD1-205ENST00000538178 EVX2Q03828 476 aa16.47■□□□□ 0.23
LMNTD1-205ENST00000538178 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
LMNTD1-205ENST00000538178 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
LMNTD1-205ENST00000538178 MIER1Q8N108 512 aa16.37■□□□□ 0.21
LMNTD1-205ENST00000538178 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
LMNTD1-205ENST00000538178 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
LMNTD1-205ENST00000538178 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
LMNTD1-205ENST00000538178 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
LMNTD1-205ENST00000538178 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
LMNTD1-205ENST00000538178 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
LMNTD1-205ENST00000538178 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
LMNTD1-205ENST00000538178 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
LMNTD1-205ENST00000538178 GABBR2O75899 941 aa16.15■□□□□ 0.18
LMNTD1-205ENST00000538178 VASPP50552 380 aaPredicted RBP16.15■□□□□ 0.18
LMNTD1-205ENST00000538178 CLCN6P51797 869 aa16.12■□□□□ 0.17
LMNTD1-205ENST00000538178 TSPYL2Q9H2G4 693 aaPredicted RBP16.04■□□□□ 0.16
LMNTD1-205ENST00000538178 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
LMNTD1-205ENST00000538178 NUBP1P53384 320 aa16.02■□□□□ 0.16
LMNTD1-205ENST00000538178 PHF12Q96QT6 1004 aa16■□□□□ 0.15
LMNTD1-205ENST00000538178 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms