RNA–Protein interactions for RNA: ENST00000537483.1

LRTOMT-213, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3

Gene LRTOMT, Length 308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-213ENST00000537483 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
LRTOMT-213ENST00000537483 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
LRTOMT-213ENST00000537483 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
LRTOMT-213ENST00000537483 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
LRTOMT-213ENST00000537483 FOXD1Q16676 465 aa18.12■□□□□ 0.49
LRTOMT-213ENST00000537483 MSH5O43196 834 aa17.29■□□□□ 0.36
LRTOMT-213ENST00000537483 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
LRTOMT-213ENST00000537483 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
LRTOMT-213ENST00000537483 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
LRTOMT-213ENST00000537483 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
LRTOMT-213ENST00000537483 ADRA2BP18089 450 aa16.55■□□□□ 0.24
LRTOMT-213ENST00000537483 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
LRTOMT-213ENST00000537483 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
LRTOMT-213ENST00000537483 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
LRTOMT-213ENST00000537483 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
LRTOMT-213ENST00000537483 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
LRTOMT-213ENST00000537483 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
LRTOMT-213ENST00000537483 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
LRTOMT-213ENST00000537483 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
LRTOMT-213ENST00000537483 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
LRTOMT-213ENST00000537483 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
LRTOMT-213ENST00000537483 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
LRTOMT-213ENST00000537483 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
LRTOMT-213ENST00000537483 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
LRTOMT-213ENST00000537483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
LRTOMT-213ENST00000537483 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
LRTOMT-213ENST00000537483 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
LRTOMT-213ENST00000537483 CAPN15O75808 1086 aa13.58□□□□□ -0.24
LRTOMT-213ENST00000537483 DSG3P32926 999 aa13.54□□□□□ -0.24
LRTOMT-213ENST00000537483 POTEHQ6S545 545 aa13.53□□□□□ -0.24
LRTOMT-213ENST00000537483 APLP2Q06481 763 aa13.51□□□□□ -0.25
LRTOMT-213ENST00000537483 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
LRTOMT-213ENST00000537483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
LRTOMT-213ENST00000537483 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
LRTOMT-213ENST00000537483 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
LRTOMT-213ENST00000537483 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
LRTOMT-213ENST00000537483 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
LRTOMT-213ENST00000537483 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
LRTOMT-213ENST00000537483 KCNA4P22459 653 aa13.17□□□□□ -0.3
LRTOMT-213ENST00000537483 ABCB7O75027 752 aa13.14□□□□□ -0.31
LRTOMT-213ENST00000537483 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-213ENST00000537483 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
LRTOMT-213ENST00000537483 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
LRTOMT-213ENST00000537483 POLA2Q14181 598 aa12.81□□□□□ -0.36
LRTOMT-213ENST00000537483 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
LRTOMT-213ENST00000537483 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
LRTOMT-213ENST00000537483 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
LRTOMT-213ENST00000537483 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
LRTOMT-213ENST00000537483 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
LRTOMT-213ENST00000537483 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
LRTOMT-213ENST00000537483 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
LRTOMT-213ENST00000537483 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
LRTOMT-213ENST00000537483 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
LRTOMT-213ENST00000537483 HAX1O00165 279 aa12.32□□□□□ -0.44
LRTOMT-213ENST00000537483 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
LRTOMT-213ENST00000537483 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
LRTOMT-213ENST00000537483 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
LRTOMT-213ENST00000537483 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
LRTOMT-213ENST00000537483 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
LRTOMT-213ENST00000537483 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
LRTOMT-213ENST00000537483 FBLN2P98095 1184 aa12.21□□□□□ -0.45
LRTOMT-213ENST00000537483 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-213ENST00000537483 ZBTB22O15209 634 aa12.02□□□□□ -0.49
LRTOMT-213ENST00000537483 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
LRTOMT-213ENST00000537483 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
LRTOMT-213ENST00000537483 EVX2Q03828 476 aa11.96□□□□□ -0.49
LRTOMT-213ENST00000537483 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
LRTOMT-213ENST00000537483 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
LRTOMT-213ENST00000537483 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
LRTOMT-213ENST00000537483 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
LRTOMT-213ENST00000537483 GABBR2O75899 941 aa11.81□□□□□ -0.52
LRTOMT-213ENST00000537483 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
LRTOMT-213ENST00000537483 CLCN6P51797 869 aa11.77□□□□□ -0.53
LRTOMT-213ENST00000537483 LHX8Q68G74 356 aa11.75□□□□□ -0.53
LRTOMT-213ENST00000537483 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
LRTOMT-213ENST00000537483 CHADLQ6NUI6 762 aa11.71□□□□□ -0.53
LRTOMT-213ENST00000537483 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
LRTOMT-213ENST00000537483 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-213ENST00000537483 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
LRTOMT-213ENST00000537483 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
LRTOMT-213ENST00000537483 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-213ENST00000537483 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
LRTOMT-213ENST00000537483 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
LRTOMT-213ENST00000537483 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
LRTOMT-213ENST00000537483 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
LRTOMT-213ENST00000537483 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
LRTOMT-213ENST00000537483 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
LRTOMT-213ENST00000537483 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
LRTOMT-213ENST00000537483 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
LRTOMT-213ENST00000537483 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
LRTOMT-213ENST00000537483 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
LRTOMT-213ENST00000537483 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
LRTOMT-213ENST00000537483 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
LRTOMT-213ENST00000537483 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
LRTOMT-213ENST00000537483 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
LRTOMT-213ENST00000537483 C7P10643 843 aa11.09□□□□□ -0.63
LRTOMT-213ENST00000537483 ASTLQ6HA08 431 aaPredicted RBP11.07□□□□□ -0.64
LRTOMT-213ENST00000537483 POTEMA6NI47 508 aa11.06□□□□□ -0.64
LRTOMT-213ENST00000537483 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
LRTOMT-213ENST00000537483 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms