RNA–Protein interactions for RNA: ENST00000535311.5

PTPRO-205, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-205ENST00000535311 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
PTPRO-205ENST00000535311 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
PTPRO-205ENST00000535311 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
PTPRO-205ENST00000535311 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
PTPRO-205ENST00000535311 FOXD1Q16676 465 aa17.94■□□□□ 0.46
PTPRO-205ENST00000535311 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
PTPRO-205ENST00000535311 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
PTPRO-205ENST00000535311 ADRA2BP18089 450 aa16.87■□□□□ 0.29
PTPRO-205ENST00000535311 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-205ENST00000535311 MSH5O43196 834 aa16.65■□□□□ 0.26
PTPRO-205ENST00000535311 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
PTPRO-205ENST00000535311 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
PTPRO-205ENST00000535311 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
PTPRO-205ENST00000535311 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.04
PTPRO-205ENST00000535311 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
PTPRO-205ENST00000535311 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
PTPRO-205ENST00000535311 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
PTPRO-205ENST00000535311 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
PTPRO-205ENST00000535311 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
PTPRO-205ENST00000535311 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
PTPRO-205ENST00000535311 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
PTPRO-205ENST00000535311 KCNA4P22459 653 aa14.36□□□□□ -0.11
PTPRO-205ENST00000535311 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
PTPRO-205ENST00000535311 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
PTPRO-205ENST00000535311 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
PTPRO-205ENST00000535311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTPRO-205ENST00000535311 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
PTPRO-205ENST00000535311 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
PTPRO-205ENST00000535311 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
PTPRO-205ENST00000535311 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
PTPRO-205ENST00000535311 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
PTPRO-205ENST00000535311 CAPN15O75808 1086 aa13.52□□□□□ -0.25
PTPRO-205ENST00000535311 DSG3P32926 999 aa13.42□□□□□ -0.26
PTPRO-205ENST00000535311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
PTPRO-205ENST00000535311 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
PTPRO-205ENST00000535311 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
PTPRO-205ENST00000535311 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
PTPRO-205ENST00000535311 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
PTPRO-205ENST00000535311 APLP2Q06481 763 aa13.34□□□□□ -0.27
PTPRO-205ENST00000535311 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
PTPRO-205ENST00000535311 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
PTPRO-205ENST00000535311 ABCB7O75027 752 aa13.25□□□□□ -0.29
PTPRO-205ENST00000535311 ZBTB22O15209 634 aa13.22□□□□□ -0.29
PTPRO-205ENST00000535311 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
PTPRO-205ENST00000535311 POLA2Q14181 598 aa13.03□□□□□ -0.32
PTPRO-205ENST00000535311 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
PTPRO-205ENST00000535311 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
PTPRO-205ENST00000535311 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
PTPRO-205ENST00000535311 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
PTPRO-205ENST00000535311 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
PTPRO-205ENST00000535311 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
PTPRO-205ENST00000535311 POTEHQ6S545 545 aa12.59□□□□□ -0.39
PTPRO-205ENST00000535311 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
PTPRO-205ENST00000535311 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
PTPRO-205ENST00000535311 FBLN2P98095 1184 aa12.49□□□□□ -0.41
PTPRO-205ENST00000535311 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
PTPRO-205ENST00000535311 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
PTPRO-205ENST00000535311 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
PTPRO-205ENST00000535311 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
PTPRO-205ENST00000535311 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
PTPRO-205ENST00000535311 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
PTPRO-205ENST00000535311 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
PTPRO-205ENST00000535311 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
PTPRO-205ENST00000535311 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
PTPRO-205ENST00000535311 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPRO-205ENST00000535311 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
PTPRO-205ENST00000535311 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTPRO-205ENST00000535311 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
PTPRO-205ENST00000535311 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
PTPRO-205ENST00000535311 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
PTPRO-205ENST00000535311 HAX1O00165 279 aa11.92□□□□□ -0.5
PTPRO-205ENST00000535311 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
PTPRO-205ENST00000535311 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
PTPRO-205ENST00000535311 EVX2Q03828 476 aa11.86□□□□□ -0.51
PTPRO-205ENST00000535311 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
PTPRO-205ENST00000535311 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
PTPRO-205ENST00000535311 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
PTPRO-205ENST00000535311 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
PTPRO-205ENST00000535311 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
PTPRO-205ENST00000535311 PROM2Q8N271 834 aa11.69□□□□□ -0.54
PTPRO-205ENST00000535311 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
PTPRO-205ENST00000535311 GABBR2O75899 941 aa11.55□□□□□ -0.56
PTPRO-205ENST00000535311 FKBP8Q14318 412 aa11.53□□□□□ -0.56
PTPRO-205ENST00000535311 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
PTPRO-205ENST00000535311 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
PTPRO-205ENST00000535311 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPRO-205ENST00000535311 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
PTPRO-205ENST00000535311 MIER1Q8N108 512 aa11.38□□□□□ -0.59
PTPRO-205ENST00000535311 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
PTPRO-205ENST00000535311 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
PTPRO-205ENST00000535311 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
PTPRO-205ENST00000535311 CLCN6P51797 869 aa11.33□□□□□ -0.6
PTPRO-205ENST00000535311 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
PTPRO-205ENST00000535311 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
PTPRO-205ENST00000535311 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
PTPRO-205ENST00000535311 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
PTPRO-205ENST00000535311 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
PTPRO-205ENST00000535311 DCBLD2Q96PD2 775 aa11.23□□□□□ -0.61
PTPRO-205ENST00000535311 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
PTPRO-205ENST00000535311 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms