RNA–Protein interactions for RNA: ENST00000534966.1

SPPL3-203, Transcript of signal peptide peptidase like 3, humanhuman

TSL 2

Gene SPPL3, Length 868 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-203ENST00000534966 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
SPPL3-203ENST00000534966 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
SPPL3-203ENST00000534966 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
SPPL3-203ENST00000534966 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
SPPL3-203ENST00000534966 FOXD1Q16676 465 aa20.41■□□□□ 0.86
SPPL3-203ENST00000534966 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
SPPL3-203ENST00000534966 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
SPPL3-203ENST00000534966 ADRA2BP18089 450 aa19.27■□□□□ 0.68
SPPL3-203ENST00000534966 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
SPPL3-203ENST00000534966 MSH5O43196 834 aa18.88■□□□□ 0.61
SPPL3-203ENST00000534966 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
SPPL3-203ENST00000534966 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
SPPL3-203ENST00000534966 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
SPPL3-203ENST00000534966 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
SPPL3-203ENST00000534966 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
SPPL3-203ENST00000534966 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
SPPL3-203ENST00000534966 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
SPPL3-203ENST00000534966 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
SPPL3-203ENST00000534966 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
SPPL3-203ENST00000534966 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
SPPL3-203ENST00000534966 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
SPPL3-203ENST00000534966 KCNA4P22459 653 aa16.56■□□□□ 0.24
SPPL3-203ENST00000534966 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
SPPL3-203ENST00000534966 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
SPPL3-203ENST00000534966 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
SPPL3-203ENST00000534966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
SPPL3-203ENST00000534966 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
SPPL3-203ENST00000534966 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
SPPL3-203ENST00000534966 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
SPPL3-203ENST00000534966 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
SPPL3-203ENST00000534966 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
SPPL3-203ENST00000534966 CAPN15O75808 1086 aa15.41■□□□□ 0.06
SPPL3-203ENST00000534966 ZBTB22O15209 634 aa15.29■□□□□ 0.04
SPPL3-203ENST00000534966 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
SPPL3-203ENST00000534966 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SPPL3-203ENST00000534966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
SPPL3-203ENST00000534966 DSG3P32926 999 aa15.27■□□□□ 0.04
SPPL3-203ENST00000534966 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
SPPL3-203ENST00000534966 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
SPPL3-203ENST00000534966 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
SPPL3-203ENST00000534966 APLP2Q06481 763 aa15.19■□□□□ 0.02
SPPL3-203ENST00000534966 ABCB7O75027 752 aa15.15■□□□□ 0.02
SPPL3-203ENST00000534966 ZNF219Q9P2Y4 722 aaPredicted RBP15.14■□□□□ 0.01
SPPL3-203ENST00000534966 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
SPPL3-203ENST00000534966 POLA2Q14181 598 aa14.9□□□□□ -0.02
SPPL3-203ENST00000534966 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
SPPL3-203ENST00000534966 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
SPPL3-203ENST00000534966 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
SPPL3-203ENST00000534966 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
SPPL3-203ENST00000534966 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
SPPL3-203ENST00000534966 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
SPPL3-203ENST00000534966 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
SPPL3-203ENST00000534966 FBLN2P98095 1184 aa14.28□□□□□ -0.12
SPPL3-203ENST00000534966 AKT1S1Q96B36 256 aa14.22□□□□□ -0.13
SPPL3-203ENST00000534966 POTEHQ6S545 545 aa14.21□□□□□ -0.13
SPPL3-203ENST00000534966 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
SPPL3-203ENST00000534966 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
SPPL3-203ENST00000534966 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
SPPL3-203ENST00000534966 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
SPPL3-203ENST00000534966 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
SPPL3-203ENST00000534966 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
SPPL3-203ENST00000534966 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
SPPL3-203ENST00000534966 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
SPPL3-203ENST00000534966 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
SPPL3-203ENST00000534966 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
SPPL3-203ENST00000534966 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
SPPL3-203ENST00000534966 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPPL3-203ENST00000534966 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
SPPL3-203ENST00000534966 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
SPPL3-203ENST00000534966 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
SPPL3-203ENST00000534966 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
SPPL3-203ENST00000534966 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
SPPL3-203ENST00000534966 HAX1O00165 279 aa13.53□□□□□ -0.24
SPPL3-203ENST00000534966 EVX2Q03828 476 aa13.49□□□□□ -0.25
SPPL3-203ENST00000534966 PROM2Q8N271 834 aa13.45□□□□□ -0.26
SPPL3-203ENST00000534966 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
SPPL3-203ENST00000534966 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
SPPL3-203ENST00000534966 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
SPPL3-203ENST00000534966 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
SPPL3-203ENST00000534966 FKBP8Q14318 412 aa13.35□□□□□ -0.27
SPPL3-203ENST00000534966 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
SPPL3-203ENST00000534966 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
SPPL3-203ENST00000534966 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
SPPL3-203ENST00000534966 GABBR2O75899 941 aa13.11□□□□□ -0.31
SPPL3-203ENST00000534966 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
SPPL3-203ENST00000534966 MIER1Q8N108 512 aa13.06□□□□□ -0.32
SPPL3-203ENST00000534966 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPPL3-203ENST00000534966 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
SPPL3-203ENST00000534966 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
SPPL3-203ENST00000534966 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
SPPL3-203ENST00000534966 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
SPPL3-203ENST00000534966 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
SPPL3-203ENST00000534966 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
SPPL3-203ENST00000534966 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
SPPL3-203ENST00000534966 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
SPPL3-203ENST00000534966 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
SPPL3-203ENST00000534966 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
SPPL3-203ENST00000534966 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
SPPL3-203ENST00000534966 CLCN6P51797 869 aa12.82□□□□□ -0.36
SPPL3-203ENST00000534966 VASPP50552 380 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms