RNA–Protein interactions for RNA: ENST00000534794.1

RSF1-212, Transcript of remodeling and spacing factor 1, humanhuman

TSL 3

Gene RSF1, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-212ENST00000534794 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
RSF1-212ENST00000534794 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
RSF1-212ENST00000534794 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
RSF1-212ENST00000534794 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
RSF1-212ENST00000534794 FOXD1Q16676 465 aa15.76■□□□□ 0.11
RSF1-212ENST00000534794 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
RSF1-212ENST00000534794 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.05
RSF1-212ENST00000534794 MSH5O43196 834 aa14.7□□□□□ -0.06
RSF1-212ENST00000534794 ADRA2BP18089 450 aa14.69□□□□□ -0.06
RSF1-212ENST00000534794 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
RSF1-212ENST00000534794 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
RSF1-212ENST00000534794 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
RSF1-212ENST00000534794 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
RSF1-212ENST00000534794 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
RSF1-212ENST00000534794 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
RSF1-212ENST00000534794 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
RSF1-212ENST00000534794 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
RSF1-212ENST00000534794 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
RSF1-212ENST00000534794 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
RSF1-212ENST00000534794 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
RSF1-212ENST00000534794 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
RSF1-212ENST00000534794 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
RSF1-212ENST00000534794 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
RSF1-212ENST00000534794 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
RSF1-212ENST00000534794 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
RSF1-212ENST00000534794 KCNA4P22459 653 aa12.33□□□□□ -0.44
RSF1-212ENST00000534794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.455e-6■■□□□ 11.4
RSF1-212ENST00000534794 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
RSF1-212ENST00000534794 SLC4A2P04920 1241 aa11.99□□□□□ -0.49
RSF1-212ENST00000534794 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
RSF1-212ENST00000534794 CAPN15O75808 1086 aa11.79□□□□□ -0.52
RSF1-212ENST00000534794 DSG3P32926 999 aa11.78□□□□□ -0.52
RSF1-212ENST00000534794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
RSF1-212ENST00000534794 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
RSF1-212ENST00000534794 APLP2Q06481 763 aa11.66□□□□□ -0.54
RSF1-212ENST00000534794 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
RSF1-212ENST00000534794 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
RSF1-212ENST00000534794 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
RSF1-212ENST00000534794 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
RSF1-212ENST00000534794 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
RSF1-212ENST00000534794 ABCB7O75027 752 aa11.55□□□□□ -0.56
RSF1-212ENST00000534794 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
RSF1-212ENST00000534794 ZBTB22O15209 634 aa11.38□□□□□ -0.59
RSF1-212ENST00000534794 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
RSF1-212ENST00000534794 POLA2Q14181 598 aa11.33□□□□□ -0.6
RSF1-212ENST00000534794 POTEHQ6S545 545 aa11.21□□□□□ -0.61
RSF1-212ENST00000534794 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
RSF1-212ENST00000534794 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
RSF1-212ENST00000534794 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
RSF1-212ENST00000534794 OSCARQ8IYS5 282 aa11□□□□□ -0.65
RSF1-212ENST00000534794 AKT1S1Q96B36 256 aa10.97□□□□□ -0.65
RSF1-212ENST00000534794 CHRDL2Q6WN34 429 aa10.96□□□□□ -0.65
RSF1-212ENST00000534794 REM2Q8IYK8 340 aaPredicted RBP10.87□□□□□ -0.67
RSF1-212ENST00000534794 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
RSF1-212ENST00000534794 MKRN4PQ13434 485 aaPredicted RBP10.83□□□□□ -0.68
RSF1-212ENST00000534794 FBLN2P98095 1184 aa10.82□□□□□ -0.68
RSF1-212ENST00000534794 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
RSF1-212ENST00000534794 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
RSF1-212ENST00000534794 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
RSF1-212ENST00000534794 PITPNM1O00562 1244 aa10.77□□□□□ -0.69
RSF1-212ENST00000534794 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
RSF1-212ENST00000534794 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
RSF1-212ENST00000534794 SSUH2Q9Y2M2 353 aa10.68□□□□□ -0.7
RSF1-212ENST00000534794 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
RSF1-212ENST00000534794 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
RSF1-212ENST00000534794 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
RSF1-212ENST00000534794 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
RSF1-212ENST00000534794 CLEC11AQ9Y240 323 aa10.51□□□□□ -0.73
RSF1-212ENST00000534794 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
RSF1-212ENST00000534794 HAX1O00165 279 aa10.46□□□□□ -0.73
RSF1-212ENST00000534794 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
RSF1-212ENST00000534794 EVX2Q03828 476 aa10.41□□□□□ -0.74
RSF1-212ENST00000534794 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
RSF1-212ENST00000534794 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
RSF1-212ENST00000534794 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
RSF1-212ENST00000534794 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
RSF1-212ENST00000534794 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
RSF1-212ENST00000534794 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
RSF1-212ENST00000534794 CREBZFQ9NS37 354 aa10.17□□□□□ -0.78
RSF1-212ENST00000534794 GABBR2O75899 941 aa10.15□□□□□ -0.78
RSF1-212ENST00000534794 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
RSF1-212ENST00000534794 PROM2Q8N271 834 aa10.13□□□□□ -0.79
RSF1-212ENST00000534794 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
RSF1-212ENST00000534794 ZNF579Q8NAF0 562 aaKnown RBP10.01□□□□□ -0.81
RSF1-212ENST00000534794 CLCN6P51797 869 aa9.99□□□□□ -0.81
RSF1-212ENST00000534794 POTEIP0CG38 1075 aa9.98□□□□□ -0.81
RSF1-212ENST00000534794 ZRANB1Q9UGI0 708 aa9.97□□□□□ -0.81
RSF1-212ENST00000534794 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
RSF1-212ENST00000534794 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
RSF1-212ENST00000534794 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
RSF1-212ENST00000534794 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
RSF1-212ENST00000534794 LHX8Q68G74 356 aa9.86□□□□□ -0.83
RSF1-212ENST00000534794 DCBLD2Q96PD2 775 aa9.83□□□□□ -0.84
RSF1-212ENST00000534794 FKBP8Q14318 412 aa9.79□□□□□ -0.84
RSF1-212ENST00000534794 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.85
RSF1-212ENST00000534794 MIER1Q8N108 512 aa9.76□□□□□ -0.85
RSF1-212ENST00000534794 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
RSF1-212ENST00000534794 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
RSF1-212ENST00000534794 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
RSF1-212ENST00000534794 RASEFQ8IZ41 740 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms