RNA–Protein interactions for RNA: ENST00000534758.1

SLC38A6-216, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 640 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-216ENST00000534758 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
SLC38A6-216ENST00000534758 CHIC1Q5VXU3 224 aa29.9■■■□□ 2.38
SLC38A6-216ENST00000534758 SENP3Q9H4L4 574 aaPredicted RBP26.61■■□□□ 1.85
SLC38A6-216ENST00000534758 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
SLC38A6-216ENST00000534758 FOXD1Q16676 465 aa24.94■■□□□ 1.58
SLC38A6-216ENST00000534758 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
SLC38A6-216ENST00000534758 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
SLC38A6-216ENST00000534758 ADRA2BP18089 450 aa23.4■■□□□ 1.34
SLC38A6-216ENST00000534758 PIAS4Q8N2W9 510 aaPredicted RBP23.27■■□□□ 1.32
SLC38A6-216ENST00000534758 MSH5O43196 834 aa23.1■■□□□ 1.29
SLC38A6-216ENST00000534758 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
SLC38A6-216ENST00000534758 MAPK8IP2Q13387 824 aaPredicted RBP21.49■■□□□ 1.03
SLC38A6-216ENST00000534758 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
SLC38A6-216ENST00000534758 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SLC38A6-216ENST00000534758 PPP4R3CPQ6ZMV5 832 aa21.02■□□□□ 0.96
SLC38A6-216ENST00000534758 CNKSR2Q8WXI2 1034 aa20.51■□□□□ 0.87
SLC38A6-216ENST00000534758 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
SLC38A6-216ENST00000534758 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
SLC38A6-216ENST00000534758 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
SLC38A6-216ENST00000534758 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
SLC38A6-216ENST00000534758 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
SLC38A6-216ENST00000534758 RNF39Q9H2S5 420 aa19.83■□□□□ 0.77
SLC38A6-216ENST00000534758 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
SLC38A6-216ENST00000534758 KCNA4P22459 653 aa19.79■□□□□ 0.76
SLC38A6-216ENST00000534758 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
SLC38A6-216ENST00000534758 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
SLC38A6-216ENST00000534758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
SLC38A6-216ENST00000534758 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SLC38A6-216ENST00000534758 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
SLC38A6-216ENST00000534758 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
SLC38A6-216ENST00000534758 CAPN15O75808 1086 aa18.73■□□□□ 0.59
SLC38A6-216ENST00000534758 DSG3P32926 999 aa18.63■□□□□ 0.57
SLC38A6-216ENST00000534758 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
SLC38A6-216ENST00000534758 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
SLC38A6-216ENST00000534758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
SLC38A6-216ENST00000534758 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
SLC38A6-216ENST00000534758 ABCB7O75027 752 aa18.4■□□□□ 0.54
SLC38A6-216ENST00000534758 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
SLC38A6-216ENST00000534758 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
SLC38A6-216ENST00000534758 APLP2Q06481 763 aa18.35■□□□□ 0.53
SLC38A6-216ENST00000534758 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
SLC38A6-216ENST00000534758 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
SLC38A6-216ENST00000534758 ZBTB22O15209 634 aa18.28■□□□□ 0.52
SLC38A6-216ENST00000534758 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
SLC38A6-216ENST00000534758 POLA2Q14181 598 aa18.03■□□□□ 0.48
SLC38A6-216ENST00000534758 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.41
SLC38A6-216ENST00000534758 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
SLC38A6-216ENST00000534758 POTEHQ6S545 545 aa17.59■□□□□ 0.41
SLC38A6-216ENST00000534758 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
SLC38A6-216ENST00000534758 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
SLC38A6-216ENST00000534758 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
SLC38A6-216ENST00000534758 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
SLC38A6-216ENST00000534758 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
SLC38A6-216ENST00000534758 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
SLC38A6-216ENST00000534758 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
SLC38A6-216ENST00000534758 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
SLC38A6-216ENST00000534758 FBLN2P98095 1184 aa17.17■□□□□ 0.34
SLC38A6-216ENST00000534758 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
SLC38A6-216ENST00000534758 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
SLC38A6-216ENST00000534758 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
SLC38A6-216ENST00000534758 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
SLC38A6-216ENST00000534758 PIP4P2Q8N4L2 257 aa16.96■□□□□ 0.31
SLC38A6-216ENST00000534758 SSUH2Q9Y2M2 353 aa16.92■□□□□ 0.3
SLC38A6-216ENST00000534758 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
SLC38A6-216ENST00000534758 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC38A6-216ENST00000534758 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
SLC38A6-216ENST00000534758 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
SLC38A6-216ENST00000534758 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
SLC38A6-216ENST00000534758 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
SLC38A6-216ENST00000534758 HAX1O00165 279 aa16.55■□□□□ 0.24
SLC38A6-216ENST00000534758 EVX2Q03828 476 aa16.54■□□□□ 0.24
SLC38A6-216ENST00000534758 SP7Q8TDD2 431 aaPredicted RBP16.54■□□□□ 0.24
SLC38A6-216ENST00000534758 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
SLC38A6-216ENST00000534758 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
SLC38A6-216ENST00000534758 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
SLC38A6-216ENST00000534758 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
SLC38A6-216ENST00000534758 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
SLC38A6-216ENST00000534758 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
SLC38A6-216ENST00000534758 STAG3Q9UJ98 1225 aa16.11■□□□□ 0.17
SLC38A6-216ENST00000534758 PROM2Q8N271 834 aa16.1■□□□□ 0.17
SLC38A6-216ENST00000534758 CD44P16070 742 aaKnown RBP16.05■□□□□ 0.16
SLC38A6-216ENST00000534758 GABBR2O75899 941 aa16.04■□□□□ 0.16
SLC38A6-216ENST00000534758 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
SLC38A6-216ENST00000534758 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
SLC38A6-216ENST00000534758 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
SLC38A6-216ENST00000534758 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
SLC38A6-216ENST00000534758 FKBP8Q14318 412 aa15.79■□□□□ 0.12
SLC38A6-216ENST00000534758 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
SLC38A6-216ENST00000534758 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
SLC38A6-216ENST00000534758 GALR2O43603 387 aaPredicted RBP15.69■□□□□ 0.1
SLC38A6-216ENST00000534758 MIER1Q8N108 512 aa15.62■□□□□ 0.09
SLC38A6-216ENST00000534758 PAK3O75914 559 aaPredicted RBP15.6■□□□□ 0.09
SLC38A6-216ENST00000534758 CLCN6P51797 869 aa15.59■□□□□ 0.09
SLC38A6-216ENST00000534758 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
SLC38A6-216ENST00000534758 DCBLD2Q96PD2 775 aa15.55■□□□□ 0.08
SLC38A6-216ENST00000534758 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
SLC38A6-216ENST00000534758 LHX8Q68G74 356 aa15.51■□□□□ 0.07
SLC38A6-216ENST00000534758 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
SLC38A6-216ENST00000534758 MS4A3Q96HJ5 214 aa15.5■□□□□ 0.07
SLC38A6-216ENST00000534758 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms