RNA–Protein interactions for RNA: ENST00000534623.1

PKHD1L1-204, Transcript of PKHD1 like 1, humanhuman

TSL 2

Gene PKHD1L1, Length 466 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-204ENST00000534623 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
PKHD1L1-204ENST00000534623 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
PKHD1L1-204ENST00000534623 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
PKHD1L1-204ENST00000534623 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
PKHD1L1-204ENST00000534623 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
PKHD1L1-204ENST00000534623 FOXD1Q16676 465 aa20.76■□□□□ 0.91
PKHD1L1-204ENST00000534623 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
PKHD1L1-204ENST00000534623 ADRA2BP18089 450 aa20.19■□□□□ 0.82
PKHD1L1-204ENST00000534623 PIAS4Q8N2W9 510 aaPredicted RBP19.55■□□□□ 0.72
PKHD1L1-204ENST00000534623 MSH5O43196 834 aa18.91■□□□□ 0.62
PKHD1L1-204ENST00000534623 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
PKHD1L1-204ENST00000534623 KCNA4P22459 653 aa18.66■□□□□ 0.58
PKHD1L1-204ENST00000534623 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
PKHD1L1-204ENST00000534623 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
PKHD1L1-204ENST00000534623 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
PKHD1L1-204ENST00000534623 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
PKHD1L1-204ENST00000534623 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
PKHD1L1-204ENST00000534623 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
PKHD1L1-204ENST00000534623 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
PKHD1L1-204ENST00000534623 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
PKHD1L1-204ENST00000534623 HOXD11P31277 338 aaPredicted RBP17.63■□□□□ 0.41
PKHD1L1-204ENST00000534623 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
PKHD1L1-204ENST00000534623 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
PKHD1L1-204ENST00000534623 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
PKHD1L1-204ENST00000534623 ZBTB22O15209 634 aa17.23■□□□□ 0.35
PKHD1L1-204ENST00000534623 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
PKHD1L1-204ENST00000534623 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
PKHD1L1-204ENST00000534623 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
PKHD1L1-204ENST00000534623 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
PKHD1L1-204ENST00000534623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
PKHD1L1-204ENST00000534623 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
PKHD1L1-204ENST00000534623 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
PKHD1L1-204ENST00000534623 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
PKHD1L1-204ENST00000534623 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
PKHD1L1-204ENST00000534623 RNF39Q9H2S5 420 aa16.31■□□□□ 0.2
PKHD1L1-204ENST00000534623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
PKHD1L1-204ENST00000534623 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
PKHD1L1-204ENST00000534623 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
PKHD1L1-204ENST00000534623 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
PKHD1L1-204ENST00000534623 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
PKHD1L1-204ENST00000534623 APLP2Q06481 763 aa16.02■□□□□ 0.16
PKHD1L1-204ENST00000534623 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
PKHD1L1-204ENST00000534623 CAPN15O75808 1086 aa15.88■□□□□ 0.13
PKHD1L1-204ENST00000534623 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
PKHD1L1-204ENST00000534623 POLA2Q14181 598 aa15.72■□□□□ 0.11
PKHD1L1-204ENST00000534623 ABCB7O75027 752 aa15.65■□□□□ 0.1
PKHD1L1-204ENST00000534623 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
PKHD1L1-204ENST00000534623 DSG3P32926 999 aa15.62■□□□□ 0.09
PKHD1L1-204ENST00000534623 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
PKHD1L1-204ENST00000534623 FKBP8Q14318 412 aa15.56■□□□□ 0.08
PKHD1L1-204ENST00000534623 FBLN2P98095 1184 aa15.43■□□□□ 0.06
PKHD1L1-204ENST00000534623 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
PKHD1L1-204ENST00000534623 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
PKHD1L1-204ENST00000534623 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
PKHD1L1-204ENST00000534623 PROM2Q8N271 834 aa15.14■□□□□ 0.01
PKHD1L1-204ENST00000534623 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
PKHD1L1-204ENST00000534623 SPDYE6P0CI01 402 aa15.03■□□□□ -0
PKHD1L1-204ENST00000534623 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
PKHD1L1-204ENST00000534623 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
PKHD1L1-204ENST00000534623 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
PKHD1L1-204ENST00000534623 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
PKHD1L1-204ENST00000534623 FBXO3Q9UK99 471 aa14.85□□□□□ -0.03
PKHD1L1-204ENST00000534623 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
PKHD1L1-204ENST00000534623 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
PKHD1L1-204ENST00000534623 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
PKHD1L1-204ENST00000534623 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
PKHD1L1-204ENST00000534623 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
PKHD1L1-204ENST00000534623 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
PKHD1L1-204ENST00000534623 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
PKHD1L1-204ENST00000534623 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
PKHD1L1-204ENST00000534623 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
PKHD1L1-204ENST00000534623 MIER1Q8N108 512 aa14.45□□□□□ -0.1
PKHD1L1-204ENST00000534623 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
PKHD1L1-204ENST00000534623 PITPNM1O00562 1244 aa14.42□□□□□ -0.1
PKHD1L1-204ENST00000534623 PLCD3Q8N3E9 789 aa14.42□□□□□ -0.1
PKHD1L1-204ENST00000534623 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
PKHD1L1-204ENST00000534623 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
PKHD1L1-204ENST00000534623 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
PKHD1L1-204ENST00000534623 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
PKHD1L1-204ENST00000534623 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
PKHD1L1-204ENST00000534623 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
PKHD1L1-204ENST00000534623 PKD2Q13563 968 aa14.22□□□□□ -0.13
PKHD1L1-204ENST00000534623 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
PKHD1L1-204ENST00000534623 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
PKHD1L1-204ENST00000534623 NUBP1P53384 320 aa14.12□□□□□ -0.15
PKHD1L1-204ENST00000534623 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
PKHD1L1-204ENST00000534623 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
PKHD1L1-204ENST00000534623 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
PKHD1L1-204ENST00000534623 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
PKHD1L1-204ENST00000534623 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
PKHD1L1-204ENST00000534623 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
PKHD1L1-204ENST00000534623 RASEFQ8IZ41 740 aa14□□□□□ -0.17
PKHD1L1-204ENST00000534623 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
PKHD1L1-204ENST00000534623 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
PKHD1L1-204ENST00000534623 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
PKHD1L1-204ENST00000534623 GSE1Q14687 1217 aa13.94□□□□□ -0.18
PKHD1L1-204ENST00000534623 RGL2O15211 777 aa13.92□□□□□ -0.18
PKHD1L1-204ENST00000534623 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
PKHD1L1-204ENST00000534623 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
PKHD1L1-204ENST00000534623 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms