RNA–Protein interactions for RNA: ENST00000534577.1

LRRC4C-206, Transcript of leucine rich repeat containing 4C, humanhuman

TSL 3

Gene LRRC4C, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4C-206ENST00000534577 CHIC1Q5VXU3 224 aa36.58■■■■□ 3.45
LRRC4C-206ENST00000534577 AEBP2Q6ZN18 517 aaPredicted RBP36.42■■■■□ 3.42
LRRC4C-206ENST00000534577 PHF23Q9BUL5 403 aaPredicted RBP32.21■■■□□ 2.75
LRRC4C-206ENST00000534577 SENP3Q9H4L4 574 aaPredicted RBP30.84■■■□□ 2.53
LRRC4C-206ENST00000534577 PLPPR3Q6T4P5 718 aa30.15■■■□□ 2.42
LRRC4C-206ENST00000534577 FOXD1Q16676 465 aa28.43■■■□□ 2.14
LRRC4C-206ENST00000534577 ADRA2BP18089 450 aa28.1■■■□□ 2.09
LRRC4C-206ENST00000534577 PPP6R1Q9UPN7 881 aa28.08■■■□□ 2.09
LRRC4C-206ENST00000534577 KCNA4P22459 653 aa27.07■■□□□ 1.92
LRRC4C-206ENST00000534577 PIAS4Q8N2W9 510 aaPredicted RBP27.05■■□□□ 1.92
LRRC4C-206ENST00000534577 PPP4R3CPQ6ZMV5 832 aa26.64■■□□□ 1.86
LRRC4C-206ENST00000534577 NCBP3Q53F19 620 aaKnown RBP26.28■■□□□ 1.8
LRRC4C-206ENST00000534577 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
LRRC4C-206ENST00000534577 SLC4A1APQ9BWU0 796 aaKnown RBP25.98■■□□□ 1.75
LRRC4C-206ENST00000534577 MSH5O43196 834 aa25.92■■□□□ 1.74
LRRC4C-206ENST00000534577 NPM3O75607 178 aaKnown RBP25.84■■□□□ 1.73
LRRC4C-206ENST00000534577 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.73
LRRC4C-206ENST00000534577 CNKSR2Q8WXI2 1034 aa25.72■■□□□ 1.71
LRRC4C-206ENST00000534577 CSRNP3Q8WYN3 585 aa25.59■■□□□ 1.69
LRRC4C-206ENST00000534577 MAPK8IP2Q13387 824 aaPredicted RBP25.18■■□□□ 1.62
LRRC4C-206ENST00000534577 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
LRRC4C-206ENST00000534577 RNF216Q9NWF9 866 aaPredicted RBP25■■□□□ 1.59
LRRC4C-206ENST00000534577 ZBTB22O15209 634 aa24.92■■□□□ 1.58
LRRC4C-206ENST00000534577 DMRT2Q9Y5R5 561 aa24.76■■□□□ 1.55
LRRC4C-206ENST00000534577 FOXD4L1Q9NU39 408 aa24.71■■□□□ 1.55
LRRC4C-206ENST00000534577 HOXD11P31277 338 aaPredicted RBP24.64■■□□□ 1.54
LRRC4C-206ENST00000534577 SLC4A2P04920 1241 aa24.15■■□□□ 1.46
LRRC4C-206ENST00000534577 MYCNP04198 464 aaPredicted RBP23.9■■□□□ 1.42
LRRC4C-206ENST00000534577 ATXN8OSP0DMR3 200 aa23.83■■□□□ 1.41
LRRC4C-206ENST00000534577 DCAF8L1A6NGE4 600 aa23.52■■□□□ 1.36
LRRC4C-206ENST00000534577 POTEDQ86YR6 584 aa23.51■■□□□ 1.35
LRRC4C-206ENST00000534577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
LRRC4C-206ENST00000534577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
LRRC4C-206ENST00000534577 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
LRRC4C-206ENST00000534577 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
LRRC4C-206ENST00000534577 U3KPZ7 1027 aaPredicted RBP23.16■■□□□ 1.3
LRRC4C-206ENST00000534577 ATF5Q9Y2D1 282 aaPredicted RBP23.08■■□□□ 1.29
LRRC4C-206ENST00000534577 FKBP8Q14318 412 aa23.05■■□□□ 1.28
LRRC4C-206ENST00000534577 APLP2Q06481 763 aa22.83■■□□□ 1.25
LRRC4C-206ENST00000534577 AMER1Q5JTC6 1135 aaPredicted RBP22.78■■□□□ 1.24
LRRC4C-206ENST00000534577 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
LRRC4C-206ENST00000534577 RTN4Q9NQC3 1192 aaKnown RBP22.65■■□□□ 1.22
LRRC4C-206ENST00000534577 RNF39Q9H2S5 420 aa22.28■■□□□ 1.16
LRRC4C-206ENST00000534577 SPINK5Q9NQ38 1064 aaPredicted RBP22.18■■□□□ 1.14
LRRC4C-206ENST00000534577 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
LRRC4C-206ENST00000534577 MKRN4PQ13434 485 aaPredicted RBP22.17■■□□□ 1.14
LRRC4C-206ENST00000534577 SPDYE4A6NLX3 237 aa22.15■■□□□ 1.14
LRRC4C-206ENST00000534577 FBLN2P98095 1184 aa22.14■■□□□ 1.13
LRRC4C-206ENST00000534577 C1QBPQ07021 282 aaKnown RBP22.11■■□□□ 1.13
LRRC4C-206ENST00000534577 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
LRRC4C-206ENST00000534577 FBXO3Q9UK99 471 aa22.07■■□□□ 1.12
LRRC4C-206ENST00000534577 CAPN15O75808 1086 aa22.05■■□□□ 1.12
LRRC4C-206ENST00000534577 POLA2Q14181 598 aa22.05■■□□□ 1.12
LRRC4C-206ENST00000534577 PROM2Q8N271 834 aa22.01■■□□□ 1.11
LRRC4C-206ENST00000534577 ZBTB12Q9Y330 459 aaPredicted RBP21.89■■□□□ 1.09
LRRC4C-206ENST00000534577 VASPP50552 380 aaPredicted RBP21.7■■□□□ 1.06
LRRC4C-206ENST00000534577 ABCB7O75027 752 aa21.69■■□□□ 1.06
LRRC4C-206ENST00000534577 DSG3P32926 999 aa21.51■■□□□ 1.03
LRRC4C-206ENST00000534577 IFNLR1Q8IU57 520 aaPredicted RBP21.44■■□□□ 1.02
LRRC4C-206ENST00000534577 SPDYE2BA6NHP3 402 aa21.35■■□□□ 1.01
LRRC4C-206ENST00000534577 SPDYE6P0CI01 402 aa21.35■■□□□ 1.01
LRRC4C-206ENST00000534577 SPDYE2Q495Y8 402 aa21.35■■□□□ 1.01
LRRC4C-206ENST00000534577 ZNF692Q9BU19 519 aaPredicted RBP21.34■■□□□ 1.01
LRRC4C-206ENST00000534577 SSUH2Q9Y2M2 353 aa21.28■■□□□ 1
LRRC4C-206ENST00000534577 OSCARQ8IYS5 282 aa21.27■■□□□ 1
LRRC4C-206ENST00000534577 STAG3Q9UJ98 1225 aa21.23■□□□□ 0.99
LRRC4C-206ENST00000534577 PKD2Q13563 968 aa21.1■□□□□ 0.97
LRRC4C-206ENST00000534577 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
LRRC4C-206ENST00000534577 SPOCK2Q92563 424 aa21.07■□□□□ 0.96
LRRC4C-206ENST00000534577 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
LRRC4C-206ENST00000534577 PLCB2Q00722 1185 aa21■□□□□ 0.95
LRRC4C-206ENST00000534577 PLCD3Q8N3E9 789 aa20.97■□□□□ 0.95
LRRC4C-206ENST00000534577 CACNB1Q02641 598 aaPredicted RBP20.95■□□□□ 0.94
LRRC4C-206ENST00000534577 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
LRRC4C-206ENST00000534577 MIER1Q8N108 512 aa20.87■□□□□ 0.93
LRRC4C-206ENST00000534577 ECM2O94769 699 aaPredicted RBP20.79■□□□□ 0.92
LRRC4C-206ENST00000534577 PLEKHG5O94827 1062 aa20.76■□□□□ 0.91
LRRC4C-206ENST00000534577 ZBTB47Q9UFB7 747 aaPredicted RBP20.76■□□□□ 0.91
LRRC4C-206ENST00000534577 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
LRRC4C-206ENST00000534577 BBXQ8WY36 941 aaPredicted RBP20.59■□□□□ 0.89
LRRC4C-206ENST00000534577 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
LRRC4C-206ENST00000534577 RGL2O15211 777 aa20.54■□□□□ 0.88
LRRC4C-206ENST00000534577 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
LRRC4C-206ENST00000534577 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
LRRC4C-206ENST00000534577 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
LRRC4C-206ENST00000534577 AKT1S1Q96B36 256 aa20.48■□□□□ 0.87
LRRC4C-206ENST00000534577 NPM1P06748 294 aaKnown RBP eCLIP20.47■□□□□ 0.87
LRRC4C-206ENST00000534577 SPDYE1Q8NFV5 336 aaPredicted RBP20.47■□□□□ 0.87
LRRC4C-206ENST00000534577 VSIG10Q8N0Z9 540 aa20.43■□□□□ 0.86
LRRC4C-206ENST00000534577 GSE1Q14687 1217 aa20.35■□□□□ 0.85
LRRC4C-206ENST00000534577 PAXIP1Q6ZW49 1069 aaPredicted RBP20.33■□□□□ 0.85
LRRC4C-206ENST00000534577 NUBP1P53384 320 aa20.29■□□□□ 0.84
LRRC4C-206ENST00000534577 CHGAP10645 457 aaKnown RBP20.25■□□□□ 0.83
LRRC4C-206ENST00000534577 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
LRRC4C-206ENST00000534577 SPRYD3Q8NCJ5 442 aa20.24■□□□□ 0.83
LRRC4C-206ENST00000534577 PRR29P0C7W0 189 aa20.23■□□□□ 0.83
LRRC4C-206ENST00000534577 REM2Q8IYK8 340 aaPredicted RBP20.23■□□□□ 0.83
LRRC4C-206ENST00000534577 CLEC11AQ9Y240 323 aa20.23■□□□□ 0.83
LRRC4C-206ENST00000534577 CREBZFQ9NS37 354 aa20.2■□□□□ 0.82
LRRC4C-206ENST00000534577 HS6ST3Q8IZP7 471 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms