RNA–Protein interactions for RNA: ENST00000534531.1

TCN1-205, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-205ENST00000534531 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
TCN1-205ENST00000534531 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
TCN1-205ENST00000534531 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
TCN1-205ENST00000534531 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
TCN1-205ENST00000534531 FOXD1Q16676 465 aa20.53■□□□□ 0.88
TCN1-205ENST00000534531 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
TCN1-205ENST00000534531 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
TCN1-205ENST00000534531 ADRA2BP18089 450 aa19.39■□□□□ 0.69
TCN1-205ENST00000534531 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
TCN1-205ENST00000534531 MSH5O43196 834 aa19.13■□□□□ 0.65
TCN1-205ENST00000534531 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
TCN1-205ENST00000534531 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
TCN1-205ENST00000534531 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
TCN1-205ENST00000534531 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
TCN1-205ENST00000534531 DMRT2Q9Y5R5 561 aa17.56■□□□□ 0.4
TCN1-205ENST00000534531 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
TCN1-205ENST00000534531 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
TCN1-205ENST00000534531 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
TCN1-205ENST00000534531 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
TCN1-205ENST00000534531 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
TCN1-205ENST00000534531 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
TCN1-205ENST00000534531 KCNA4P22459 653 aa16.73■□□□□ 0.27
TCN1-205ENST00000534531 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
TCN1-205ENST00000534531 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
TCN1-205ENST00000534531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
TCN1-205ENST00000534531 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
TCN1-205ENST00000534531 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
TCN1-205ENST00000534531 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
TCN1-205ENST00000534531 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
TCN1-205ENST00000534531 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
TCN1-205ENST00000534531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
TCN1-205ENST00000534531 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
TCN1-205ENST00000534531 CAPN15O75808 1086 aa15.59■□□□□ 0.09
TCN1-205ENST00000534531 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
TCN1-205ENST00000534531 APLP2Q06481 763 aa15.55■□□□□ 0.08
TCN1-205ENST00000534531 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
TCN1-205ENST00000534531 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
TCN1-205ENST00000534531 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
TCN1-205ENST00000534531 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
TCN1-205ENST00000534531 DSG3P32926 999 aa15.4■□□□□ 0.06
TCN1-205ENST00000534531 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
TCN1-205ENST00000534531 ZBTB22O15209 634 aa15.36■□□□□ 0.05
TCN1-205ENST00000534531 ABCB7O75027 752 aa15.24■□□□□ 0.03
TCN1-205ENST00000534531 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
TCN1-205ENST00000534531 POLA2Q14181 598 aa15.06■□□□□ 0
TCN1-205ENST00000534531 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
TCN1-205ENST00000534531 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
TCN1-205ENST00000534531 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
TCN1-205ENST00000534531 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
TCN1-205ENST00000534531 RBM42Q9BTD8 480 aaKnown RBP14.71□□□□□ -0.05
TCN1-205ENST00000534531 FBLN2P98095 1184 aa14.56□□□□□ -0.08
TCN1-205ENST00000534531 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
TCN1-205ENST00000534531 MKRN4PQ13434 485 aaPredicted RBP14.44□□□□□ -0.1
TCN1-205ENST00000534531 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
TCN1-205ENST00000534531 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
TCN1-205ENST00000534531 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
TCN1-205ENST00000534531 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
TCN1-205ENST00000534531 POTEHQ6S545 545 aa14.29□□□□□ -0.12
TCN1-205ENST00000534531 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
TCN1-205ENST00000534531 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
TCN1-205ENST00000534531 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
TCN1-205ENST00000534531 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
TCN1-205ENST00000534531 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
TCN1-205ENST00000534531 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCN1-205ENST00000534531 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
TCN1-205ENST00000534531 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
TCN1-205ENST00000534531 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
TCN1-205ENST00000534531 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
TCN1-205ENST00000534531 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
TCN1-205ENST00000534531 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
TCN1-205ENST00000534531 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
TCN1-205ENST00000534531 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
TCN1-205ENST00000534531 HAX1O00165 279 aa13.67□□□□□ -0.22
TCN1-205ENST00000534531 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
TCN1-205ENST00000534531 PROM2Q8N271 834 aa13.61□□□□□ -0.23
TCN1-205ENST00000534531 FKBP8Q14318 412 aa13.56□□□□□ -0.24
TCN1-205ENST00000534531 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
TCN1-205ENST00000534531 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
TCN1-205ENST00000534531 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
TCN1-205ENST00000534531 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
TCN1-205ENST00000534531 EVX2Q03828 476 aa13.47□□□□□ -0.25
TCN1-205ENST00000534531 CD44P16070 742 aaKnown RBP13.36□□□□□ -0.27
TCN1-205ENST00000534531 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
TCN1-205ENST00000534531 MIER1Q8N108 512 aa13.3□□□□□ -0.28
TCN1-205ENST00000534531 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
TCN1-205ENST00000534531 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
TCN1-205ENST00000534531 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
TCN1-205ENST00000534531 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
TCN1-205ENST00000534531 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
TCN1-205ENST00000534531 GABBR2O75899 941 aa13.21□□□□□ -0.29
TCN1-205ENST00000534531 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
TCN1-205ENST00000534531 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
TCN1-205ENST00000534531 CLCN6P51797 869 aa13.13□□□□□ -0.31
TCN1-205ENST00000534531 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
TCN1-205ENST00000534531 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
TCN1-205ENST00000534531 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
TCN1-205ENST00000534531 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
TCN1-205ENST00000534531 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
TCN1-205ENST00000534531 GALR2O43603 387 aaPredicted RBP12.97□□□□□ -0.33
TCN1-205ENST00000534531 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms