RNA–Protein interactions for RNA: ENST00000534463.5

PDE4B-218, Transcript of phosphodiesterase 4B, humanhuman

TSL 3

Gene PDE4B, Length 866 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-218ENST00000534463 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
PDE4B-218ENST00000534463 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
PDE4B-218ENST00000534463 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.33
PDE4B-218ENST00000534463 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
PDE4B-218ENST00000534463 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
PDE4B-218ENST00000534463 FOXD1Q16676 465 aa21.34■■□□□ 1.01
PDE4B-218ENST00000534463 ADRA2BP18089 450 aa20.62■□□□□ 0.89
PDE4B-218ENST00000534463 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
PDE4B-218ENST00000534463 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
PDE4B-218ENST00000534463 MSH5O43196 834 aa19.71■□□□□ 0.75
PDE4B-218ENST00000534463 PPP4R3CPQ6ZMV5 832 aa19.14■□□□□ 0.65
PDE4B-218ENST00000534463 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
PDE4B-218ENST00000534463 KCNA4P22459 653 aa18.83■□□□□ 0.6
PDE4B-218ENST00000534463 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
PDE4B-218ENST00000534463 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
PDE4B-218ENST00000534463 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
PDE4B-218ENST00000534463 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
PDE4B-218ENST00000534463 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
PDE4B-218ENST00000534463 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
PDE4B-218ENST00000534463 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
PDE4B-218ENST00000534463 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
PDE4B-218ENST00000534463 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
PDE4B-218ENST00000534463 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
PDE4B-218ENST00000534463 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
PDE4B-218ENST00000534463 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
PDE4B-218ENST00000534463 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
PDE4B-218ENST00000534463 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
PDE4B-218ENST00000534463 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
PDE4B-218ENST00000534463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDE4B-218ENST00000534463 ZBTB22O15209 634 aa17.28■□□□□ 0.36
PDE4B-218ENST00000534463 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
PDE4B-218ENST00000534463 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
PDE4B-218ENST00000534463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
PDE4B-218ENST00000534463 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
PDE4B-218ENST00000534463 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
PDE4B-218ENST00000534463 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
PDE4B-218ENST00000534463 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
PDE4B-218ENST00000534463 APLP2Q06481 763 aa16.71■□□□□ 0.27
PDE4B-218ENST00000534463 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
PDE4B-218ENST00000534463 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
PDE4B-218ENST00000534463 CAPN15O75808 1086 aa16.44■□□□□ 0.22
PDE4B-218ENST00000534463 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
PDE4B-218ENST00000534463 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
PDE4B-218ENST00000534463 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
PDE4B-218ENST00000534463 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
PDE4B-218ENST00000534463 POLA2Q14181 598 aa16.12■□□□□ 0.17
PDE4B-218ENST00000534463 ABCB7O75027 752 aa16.1■□□□□ 0.17
PDE4B-218ENST00000534463 DSG3P32926 999 aa16.07■□□□□ 0.16
PDE4B-218ENST00000534463 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
PDE4B-218ENST00000534463 FBLN2P98095 1184 aa15.92■□□□□ 0.14
PDE4B-218ENST00000534463 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
PDE4B-218ENST00000534463 FKBP8Q14318 412 aa15.7■□□□□ 0.1
PDE4B-218ENST00000534463 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
PDE4B-218ENST00000534463 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
PDE4B-218ENST00000534463 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
PDE4B-218ENST00000534463 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
PDE4B-218ENST00000534463 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
PDE4B-218ENST00000534463 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
PDE4B-218ENST00000534463 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
PDE4B-218ENST00000534463 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
PDE4B-218ENST00000534463 PROM2Q8N271 834 aa15.27■□□□□ 0.04
PDE4B-218ENST00000534463 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDE4B-218ENST00000534463 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
PDE4B-218ENST00000534463 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
PDE4B-218ENST00000534463 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
PDE4B-218ENST00000534463 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
PDE4B-218ENST00000534463 SPDYE1Q8NFV5 336 aaPredicted RBP15□□□□□ -0.01
PDE4B-218ENST00000534463 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
PDE4B-218ENST00000534463 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
PDE4B-218ENST00000534463 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
PDE4B-218ENST00000534463 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
PDE4B-218ENST00000534463 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
PDE4B-218ENST00000534463 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
PDE4B-218ENST00000534463 MIER1Q8N108 512 aa14.78□□□□□ -0.04
PDE4B-218ENST00000534463 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
PDE4B-218ENST00000534463 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
PDE4B-218ENST00000534463 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
PDE4B-218ENST00000534463 ZBTB47Q9UFB7 747 aaPredicted RBP14.66□□□□□ -0.06
PDE4B-218ENST00000534463 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
PDE4B-218ENST00000534463 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
PDE4B-218ENST00000534463 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.08
PDE4B-218ENST00000534463 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
PDE4B-218ENST00000534463 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
PDE4B-218ENST00000534463 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
PDE4B-218ENST00000534463 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
PDE4B-218ENST00000534463 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
PDE4B-218ENST00000534463 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
PDE4B-218ENST00000534463 MNX1P50219 401 aaPredicted RBP14.43□□□□□ -0.1
PDE4B-218ENST00000534463 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
PDE4B-218ENST00000534463 NUBP1P53384 320 aa14.32□□□□□ -0.12
PDE4B-218ENST00000534463 POTEHQ6S545 545 aa14.31□□□□□ -0.12
PDE4B-218ENST00000534463 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
PDE4B-218ENST00000534463 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
PDE4B-218ENST00000534463 GSE1Q14687 1217 aa14.27□□□□□ -0.13
PDE4B-218ENST00000534463 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
PDE4B-218ENST00000534463 RASEFQ8IZ41 740 aa14.24□□□□□ -0.13
PDE4B-218ENST00000534463 PKD2Q13563 968 aa14.22□□□□□ -0.13
PDE4B-218ENST00000534463 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
PDE4B-218ENST00000534463 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
PDE4B-218ENST00000534463 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms