RNA–Protein interactions for RNA: ENST00000534451.2

GEN1-206, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-206ENST00000534451 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
GEN1-206ENST00000534451 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
GEN1-206ENST00000534451 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
GEN1-206ENST00000534451 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
GEN1-206ENST00000534451 FOXD1Q16676 465 aa17.47■□□□□ 0.39
GEN1-206ENST00000534451 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
GEN1-206ENST00000534451 PIAS4Q8N2W9 510 aaPredicted RBP16.42■□□□□ 0.22
GEN1-206ENST00000534451 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
GEN1-206ENST00000534451 ADRA2BP18089 450 aa16.4■□□□□ 0.22
GEN1-206ENST00000534451 MSH5O43196 834 aa16.36■□□□□ 0.21
GEN1-206ENST00000534451 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
GEN1-206ENST00000534451 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
GEN1-206ENST00000534451 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
GEN1-206ENST00000534451 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
GEN1-206ENST00000534451 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
GEN1-206ENST00000534451 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
GEN1-206ENST00000534451 DCAF8L1A6NGE4 600 aa14.41□□□□□ -0.1
GEN1-206ENST00000534451 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
GEN1-206ENST00000534451 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
GEN1-206ENST00000534451 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
GEN1-206ENST00000534451 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
GEN1-206ENST00000534451 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
GEN1-206ENST00000534451 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
GEN1-206ENST00000534451 KCNA4P22459 653 aa13.9□□□□□ -0.18
GEN1-206ENST00000534451 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
GEN1-206ENST00000534451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
GEN1-206ENST00000534451 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
GEN1-206ENST00000534451 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
GEN1-206ENST00000534451 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
GEN1-206ENST00000534451 CAPN15O75808 1086 aa13.28□□□□□ -0.28
GEN1-206ENST00000534451 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
GEN1-206ENST00000534451 APLP2Q06481 763 aa13.2□□□□□ -0.3
GEN1-206ENST00000534451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
GEN1-206ENST00000534451 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
GEN1-206ENST00000534451 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
GEN1-206ENST00000534451 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
GEN1-206ENST00000534451 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
GEN1-206ENST00000534451 DSG3P32926 999 aa13.09□□□□□ -0.31
GEN1-206ENST00000534451 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
GEN1-206ENST00000534451 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
GEN1-206ENST00000534451 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
GEN1-206ENST00000534451 ABCB7O75027 752 aa12.95□□□□□ -0.34
GEN1-206ENST00000534451 POLA2Q14181 598 aa12.74□□□□□ -0.37
GEN1-206ENST00000534451 ZBTB22O15209 634 aa12.73□□□□□ -0.37
GEN1-206ENST00000534451 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
GEN1-206ENST00000534451 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
GEN1-206ENST00000534451 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
GEN1-206ENST00000534451 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
GEN1-206ENST00000534451 POTEHQ6S545 545 aa12.38□□□□□ -0.43
GEN1-206ENST00000534451 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
GEN1-206ENST00000534451 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
GEN1-206ENST00000534451 FBLN2P98095 1184 aa12.28□□□□□ -0.44
GEN1-206ENST00000534451 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
GEN1-206ENST00000534451 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
GEN1-206ENST00000534451 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
GEN1-206ENST00000534451 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
GEN1-206ENST00000534451 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
GEN1-206ENST00000534451 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
GEN1-206ENST00000534451 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
GEN1-206ENST00000534451 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
GEN1-206ENST00000534451 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
GEN1-206ENST00000534451 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
GEN1-206ENST00000534451 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
GEN1-206ENST00000534451 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
GEN1-206ENST00000534451 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
GEN1-206ENST00000534451 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
GEN1-206ENST00000534451 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
GEN1-206ENST00000534451 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
GEN1-206ENST00000534451 HAX1O00165 279 aa11.74□□□□□ -0.53
GEN1-206ENST00000534451 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
GEN1-206ENST00000534451 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
GEN1-206ENST00000534451 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
GEN1-206ENST00000534451 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
GEN1-206ENST00000534451 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
GEN1-206ENST00000534451 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
GEN1-206ENST00000534451 EVX2Q03828 476 aa11.49□□□□□ -0.57
GEN1-206ENST00000534451 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
GEN1-206ENST00000534451 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
GEN1-206ENST00000534451 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
GEN1-206ENST00000534451 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
GEN1-206ENST00000534451 GABBR2O75899 941 aa11.29□□□□□ -0.6
GEN1-206ENST00000534451 PROM2Q8N271 834 aa11.29□□□□□ -0.6
GEN1-206ENST00000534451 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
GEN1-206ENST00000534451 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
GEN1-206ENST00000534451 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
GEN1-206ENST00000534451 FKBP8Q14318 412 aa11.21□□□□□ -0.61
GEN1-206ENST00000534451 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
GEN1-206ENST00000534451 CLCN6P51797 869 aa11.19□□□□□ -0.62
GEN1-206ENST00000534451 MIER1Q8N108 512 aa11.16□□□□□ -0.62
GEN1-206ENST00000534451 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
GEN1-206ENST00000534451 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
GEN1-206ENST00000534451 PLCD3Q8N3E9 789 aa11.09□□□□□ -0.63
GEN1-206ENST00000534451 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
GEN1-206ENST00000534451 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
GEN1-206ENST00000534451 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
GEN1-206ENST00000534451 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
GEN1-206ENST00000534451 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
GEN1-206ENST00000534451 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
GEN1-206ENST00000534451 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
GEN1-206ENST00000534451 LHX8Q68G74 356 aa10.95□□□□□ -0.66
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