RNA–Protein interactions for RNA: ENST00000533228.1

EED-209, Transcript of embryonic ectoderm development, humanhuman

TSL 2

Gene EED, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EED-209ENST00000533228 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
EED-209ENST00000533228 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
EED-209ENST00000533228 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
EED-209ENST00000533228 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
EED-209ENST00000533228 FOXD1Q16676 465 aa24.27■■□□□ 1.48
EED-209ENST00000533228 MSH5O43196 834 aa22.97■■□□□ 1.27
EED-209ENST00000533228 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
EED-209ENST00000533228 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
EED-209ENST00000533228 PIAS4Q8N2W9 510 aaPredicted RBP22.67■■□□□ 1.22
EED-209ENST00000533228 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
EED-209ENST00000533228 ADRA2BP18089 450 aa22.31■■□□□ 1.16
EED-209ENST00000533228 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
EED-209ENST00000533228 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
EED-209ENST00000533228 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
EED-209ENST00000533228 CACNB1Q02641 598 aaPredicted RBP19.92■□□□□ 0.78
EED-209ENST00000533228 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
EED-209ENST00000533228 PPP4R3CPQ6ZMV5 832 aa19.83■□□□□ 0.77
EED-209ENST00000533228 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
EED-209ENST00000533228 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.72
EED-209ENST00000533228 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
EED-209ENST00000533228 RNF216Q9NWF9 866 aaPredicted RBP19.48■□□□□ 0.71
EED-209ENST00000533228 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
EED-209ENST00000533228 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
EED-209ENST00000533228 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
EED-209ENST00000533228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
EED-209ENST00000533228 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
EED-209ENST00000533228 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
EED-209ENST00000533228 CAPN15O75808 1086 aa18.22■□□□□ 0.51
EED-209ENST00000533228 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
EED-209ENST00000533228 DSG3P32926 999 aa18.12■□□□□ 0.49
EED-209ENST00000533228 KCNA4P22459 653 aa17.96■□□□□ 0.47
EED-209ENST00000533228 APLP2Q06481 763 aa17.95■□□□□ 0.46
EED-209ENST00000533228 POTEHQ6S545 545 aa17.93■□□□□ 0.46
EED-209ENST00000533228 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
EED-209ENST00000533228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
EED-209ENST00000533228 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
EED-209ENST00000533228 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
EED-209ENST00000533228 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
EED-209ENST00000533228 ABCB7O75027 752 aa17.71■□□□□ 0.43
EED-209ENST00000533228 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
EED-209ENST00000533228 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
EED-209ENST00000533228 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
EED-209ENST00000533228 POLA2Q14181 598 aa17.24■□□□□ 0.35
EED-209ENST00000533228 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
EED-209ENST00000533228 ZBTB12Q9Y330 459 aaPredicted RBP16.97■□□□□ 0.31
EED-209ENST00000533228 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
EED-209ENST00000533228 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
EED-209ENST00000533228 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
EED-209ENST00000533228 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
EED-209ENST00000533228 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
EED-209ENST00000533228 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
EED-209ENST00000533228 SP7Q8TDD2 431 aaPredicted RBP16.65■□□□□ 0.26
EED-209ENST00000533228 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
EED-209ENST00000533228 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
EED-209ENST00000533228 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
EED-209ENST00000533228 HAX1O00165 279 aa16.45■□□□□ 0.22
EED-209ENST00000533228 ZBTB22O15209 634 aa16.45■□□□□ 0.22
EED-209ENST00000533228 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
EED-209ENST00000533228 FBLN2P98095 1184 aa16.39■□□□□ 0.21
EED-209ENST00000533228 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
EED-209ENST00000533228 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
EED-209ENST00000533228 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
EED-209ENST00000533228 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
EED-209ENST00000533228 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
EED-209ENST00000533228 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
EED-209ENST00000533228 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
EED-209ENST00000533228 EVX2Q03828 476 aa16.07■□□□□ 0.16
EED-209ENST00000533228 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
EED-209ENST00000533228 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
EED-209ENST00000533228 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
EED-209ENST00000533228 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
EED-209ENST00000533228 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
EED-209ENST00000533228 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
EED-209ENST00000533228 GABBR2O75899 941 aa15.78■□□□□ 0.12
EED-209ENST00000533228 LHX8Q68G74 356 aa15.62■□□□□ 0.09
EED-209ENST00000533228 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
EED-209ENST00000533228 FARP1Q9Y4F1 1045 aaPredicted RBP15.58■□□□□ 0.08
EED-209ENST00000533228 CLCN6P51797 869 aa15.54■□□□□ 0.08
EED-209ENST00000533228 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
EED-209ENST00000533228 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
EED-209ENST00000533228 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
EED-209ENST00000533228 DCBLD2Q96PD2 775 aa15.37■□□□□ 0.05
EED-209ENST00000533228 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
EED-209ENST00000533228 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
EED-209ENST00000533228 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
EED-209ENST00000533228 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
EED-209ENST00000533228 PAK3O75914 559 aaPredicted RBP15.21■□□□□ 0.03
EED-209ENST00000533228 GALR2O43603 387 aaPredicted RBP15.12■□□□□ 0.01
EED-209ENST00000533228 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
EED-209ENST00000533228 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
EED-209ENST00000533228 PHF12Q96QT6 1004 aa15.02■□□□□ -0
EED-209ENST00000533228 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
EED-209ENST00000533228 PLSCR2Q9NRY7 297 aa14.93□□□□□ -0.02
EED-209ENST00000533228 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
EED-209ENST00000533228 POTEB2H3BUK9 544 aa14.85□□□□□ -0.03
EED-209ENST00000533228 MS4A3Q96HJ5 214 aa14.82□□□□□ -0.04
EED-209ENST00000533228 ASTLQ6HA08 431 aaPredicted RBP14.81□□□□□ -0.04
EED-209ENST00000533228 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
EED-209ENST00000533228 SLC39A7Q92504 469 aa14.8□□□□□ -0.04
EED-209ENST00000533228 METRNQ9UJH8 293 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms