RNA–Protein interactions for RNA: ENST00000533119.1

SCP2-216, Transcript of sterol carrier protein 2, humanhuman

TSL 5

Gene SCP2, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-216ENST00000533119 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
SCP2-216ENST00000533119 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
SCP2-216ENST00000533119 SENP3Q9H4L4 574 aaPredicted RBP24.31■■□□□ 1.48
SCP2-216ENST00000533119 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
SCP2-216ENST00000533119 FOXD1Q16676 465 aa22.34■■□□□ 1.17
SCP2-216ENST00000533119 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
SCP2-216ENST00000533119 MSH5O43196 834 aa21.11■□□□□ 0.97
SCP2-216ENST00000533119 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
SCP2-216ENST00000533119 ADRA2BP18089 450 aa21.03■□□□□ 0.96
SCP2-216ENST00000533119 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
SCP2-216ENST00000533119 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
SCP2-216ENST00000533119 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
SCP2-216ENST00000533119 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
SCP2-216ENST00000533119 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
SCP2-216ENST00000533119 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
SCP2-216ENST00000533119 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
SCP2-216ENST00000533119 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
SCP2-216ENST00000533119 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
SCP2-216ENST00000533119 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
SCP2-216ENST00000533119 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
SCP2-216ENST00000533119 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
SCP2-216ENST00000533119 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
SCP2-216ENST00000533119 KCNA4P22459 653 aa18.14■□□□□ 0.49
SCP2-216ENST00000533119 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
SCP2-216ENST00000533119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.458e-10■□□□□ 9.9
SCP2-216ENST00000533119 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
SCP2-216ENST00000533119 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
SCP2-216ENST00000533119 APLP2Q06481 763 aa17.39■□□□□ 0.37
SCP2-216ENST00000533119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
SCP2-216ENST00000533119 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
SCP2-216ENST00000533119 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
SCP2-216ENST00000533119 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
SCP2-216ENST00000533119 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
SCP2-216ENST00000533119 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
SCP2-216ENST00000533119 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
SCP2-216ENST00000533119 CAPN15O75808 1086 aa17.07■□□□□ 0.32
SCP2-216ENST00000533119 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
SCP2-216ENST00000533119 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
SCP2-216ENST00000533119 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
SCP2-216ENST00000533119 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
SCP2-216ENST00000533119 DSG3P32926 999 aa16.8■□□□□ 0.28
SCP2-216ENST00000533119 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
SCP2-216ENST00000533119 ZBTB22O15209 634 aa16.54■□□□□ 0.24
SCP2-216ENST00000533119 ABCB7O75027 752 aa16.54■□□□□ 0.24
SCP2-216ENST00000533119 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
SCP2-216ENST00000533119 POLA2Q14181 598 aa16.44■□□□□ 0.22
SCP2-216ENST00000533119 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
SCP2-216ENST00000533119 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
SCP2-216ENST00000533119 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
SCP2-216ENST00000533119 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
SCP2-216ENST00000533119 FBLN2P98095 1184 aa16.11■□□□□ 0.17
SCP2-216ENST00000533119 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
SCP2-216ENST00000533119 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
SCP2-216ENST00000533119 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
SCP2-216ENST00000533119 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
SCP2-216ENST00000533119 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
SCP2-216ENST00000533119 POTEHQ6S545 545 aa15.63■□□□□ 0.09
SCP2-216ENST00000533119 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
SCP2-216ENST00000533119 CHRDL2Q6WN34 429 aa15.62■□□□□ 0.09
SCP2-216ENST00000533119 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
SCP2-216ENST00000533119 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
SCP2-216ENST00000533119 SSUH2Q9Y2M2 353 aa15.51■□□□□ 0.07
SCP2-216ENST00000533119 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
SCP2-216ENST00000533119 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
SCP2-216ENST00000533119 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
SCP2-216ENST00000533119 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
SCP2-216ENST00000533119 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
SCP2-216ENST00000533119 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCP2-216ENST00000533119 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
SCP2-216ENST00000533119 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
SCP2-216ENST00000533119 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
SCP2-216ENST00000533119 PRKAR2AP13861 404 aaKnown RBP15.07■□□□□ 0
SCP2-216ENST00000533119 HAX1O00165 279 aa14.98□□□□□ -0.01
SCP2-216ENST00000533119 PROM2Q8N271 834 aa14.89□□□□□ -0.03
SCP2-216ENST00000533119 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
SCP2-216ENST00000533119 SP7Q8TDD2 431 aaPredicted RBP14.84□□□□□ -0.03
SCP2-216ENST00000533119 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
SCP2-216ENST00000533119 FARP1Q9Y4F1 1045 aaPredicted RBP14.8□□□□□ -0.04
SCP2-216ENST00000533119 FKBP8Q14318 412 aa14.77□□□□□ -0.05
SCP2-216ENST00000533119 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCP2-216ENST00000533119 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
SCP2-216ENST00000533119 CLCN6P51797 869 aa14.73□□□□□ -0.05
SCP2-216ENST00000533119 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
SCP2-216ENST00000533119 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
SCP2-216ENST00000533119 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
SCP2-216ENST00000533119 CD44P16070 742 aaKnown RBP14.63□□□□□ -0.07
SCP2-216ENST00000533119 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
SCP2-216ENST00000533119 MIER1Q8N108 512 aa14.58□□□□□ -0.08
SCP2-216ENST00000533119 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
SCP2-216ENST00000533119 EVX2Q03828 476 aa14.49□□□□□ -0.09
SCP2-216ENST00000533119 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
SCP2-216ENST00000533119 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
SCP2-216ENST00000533119 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
SCP2-216ENST00000533119 GABBR2O75899 941 aa14.42□□□□□ -0.1
SCP2-216ENST00000533119 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
SCP2-216ENST00000533119 VASPP50552 380 aaPredicted RBP14.25□□□□□ -0.13
SCP2-216ENST00000533119 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
SCP2-216ENST00000533119 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
SCP2-216ENST00000533119 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
SCP2-216ENST00000533119 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms