RNA–Protein interactions for RNA: ENST00000533067.1

GIF-204, Transcript of gastric intrinsic factor, humanhuman

TSL 3

Gene GIF, Length 386 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIF-204ENST00000533067 AEBP2Q6ZN18 517 aaPredicted RBP32.55■■■□□ 2.8
GIF-204ENST00000533067 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
GIF-204ENST00000533067 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
GIF-204ENST00000533067 PHF23Q9BUL5 403 aaPredicted RBP27.4■■□□□ 1.98
GIF-204ENST00000533067 FOXD1Q16676 465 aa25.93■■□□□ 1.74
GIF-204ENST00000533067 PLPPR3Q6T4P5 718 aa24.46■■□□□ 1.51
GIF-204ENST00000533067 MSH5O43196 834 aa24.32■■□□□ 1.48
GIF-204ENST00000533067 PIAS4Q8N2W9 510 aaPredicted RBP24.18■■□□□ 1.46
GIF-204ENST00000533067 PPP6R1Q9UPN7 881 aa24.11■■□□□ 1.45
GIF-204ENST00000533067 POTEDQ86YR6 584 aa24.07■■□□□ 1.44
GIF-204ENST00000533067 ADRA2BP18089 450 aa24.02■■□□□ 1.44
GIF-204ENST00000533067 MAPK8IP2Q13387 824 aaPredicted RBP22.12■■□□□ 1.13
GIF-204ENST00000533067 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
GIF-204ENST00000533067 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
GIF-204ENST00000533067 PPP4R3CPQ6ZMV5 832 aa21.42■■□□□ 1.02
GIF-204ENST00000533067 DCAF8L1A6NGE4 600 aa21.12■□□□□ 0.97
GIF-204ENST00000533067 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
GIF-204ENST00000533067 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
GIF-204ENST00000533067 CACNB1Q02641 598 aaPredicted RBP20.99■□□□□ 0.95
GIF-204ENST00000533067 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
GIF-204ENST00000533067 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
GIF-204ENST00000533067 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
GIF-204ENST00000533067 C1QBPQ07021 282 aaKnown RBP20.43■□□□□ 0.86
GIF-204ENST00000533067 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
GIF-204ENST00000533067 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
GIF-204ENST00000533067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.81
GIF-204ENST00000533067 KCNA4P22459 653 aa19.7■□□□□ 0.74
GIF-204ENST00000533067 U3KPZ7 1027 aaPredicted RBP19.69■□□□□ 0.74
GIF-204ENST00000533067 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
GIF-204ENST00000533067 CAPN15O75808 1086 aa19.43■□□□□ 0.7
GIF-204ENST00000533067 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
GIF-204ENST00000533067 DSG3P32926 999 aa19.37■□□□□ 0.69
GIF-204ENST00000533067 APLP2Q06481 763 aa19.1■□□□□ 0.65
GIF-204ENST00000533067 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
GIF-204ENST00000533067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
GIF-204ENST00000533067 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
GIF-204ENST00000533067 ZNF219Q9P2Y4 722 aaPredicted RBP19.03■□□□□ 0.64
GIF-204ENST00000533067 ABCB7O75027 752 aa18.97■□□□□ 0.63
GIF-204ENST00000533067 SAMD1Q6SPF0 538 aaPredicted RBP18.93■□□□□ 0.62
GIF-204ENST00000533067 POTEHQ6S545 545 aa18.83■□□□□ 0.6
GIF-204ENST00000533067 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
GIF-204ENST00000533067 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
GIF-204ENST00000533067 POLA2Q14181 598 aa18.53■□□□□ 0.56
GIF-204ENST00000533067 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
GIF-204ENST00000533067 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
GIF-204ENST00000533067 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.52
GIF-204ENST00000533067 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
GIF-204ENST00000533067 ZBTB12Q9Y330 459 aaPredicted RBP18.12■□□□□ 0.49
GIF-204ENST00000533067 ZBTB22O15209 634 aa18.11■□□□□ 0.49
GIF-204ENST00000533067 AKT1S1Q96B36 256 aa18.01■□□□□ 0.47
GIF-204ENST00000533067 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
GIF-204ENST00000533067 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
GIF-204ENST00000533067 REM2Q8IYK8 340 aaPredicted RBP17.85■□□□□ 0.45
GIF-204ENST00000533067 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
GIF-204ENST00000533067 PITPNM1O00562 1244 aa17.67■□□□□ 0.42
GIF-204ENST00000533067 FBLN2P98095 1184 aa17.6■□□□□ 0.41
GIF-204ENST00000533067 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
GIF-204ENST00000533067 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
GIF-204ENST00000533067 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
GIF-204ENST00000533067 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
GIF-204ENST00000533067 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
GIF-204ENST00000533067 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
GIF-204ENST00000533067 HAX1O00165 279 aa17.41■□□□□ 0.38
GIF-204ENST00000533067 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
GIF-204ENST00000533067 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
GIF-204ENST00000533067 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
GIF-204ENST00000533067 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
GIF-204ENST00000533067 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
GIF-204ENST00000533067 EVX2Q03828 476 aa17.2■□□□□ 0.34
GIF-204ENST00000533067 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
GIF-204ENST00000533067 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
GIF-204ENST00000533067 C19orf67A6NJJ6 358 aa16.99■□□□□ 0.31
GIF-204ENST00000533067 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
GIF-204ENST00000533067 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
GIF-204ENST00000533067 GABBR2O75899 941 aa16.79■□□□□ 0.28
GIF-204ENST00000533067 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
GIF-204ENST00000533067 FARP1Q9Y4F1 1045 aaPredicted RBP16.7■□□□□ 0.26
GIF-204ENST00000533067 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
GIF-204ENST00000533067 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
GIF-204ENST00000533067 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
GIF-204ENST00000533067 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
GIF-204ENST00000533067 LHX8Q68G74 356 aa16.47■□□□□ 0.23
GIF-204ENST00000533067 CLCN6P51797 869 aa16.45■□□□□ 0.22
GIF-204ENST00000533067 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
GIF-204ENST00000533067 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
GIF-204ENST00000533067 ZNF579Q8NAF0 562 aaKnown RBP16.38■□□□□ 0.21
GIF-204ENST00000533067 DCBLD2Q96PD2 775 aa16.29■□□□□ 0.2
GIF-204ENST00000533067 GALR2O43603 387 aaPredicted RBP16.21■□□□□ 0.19
GIF-204ENST00000533067 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
GIF-204ENST00000533067 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
GIF-204ENST00000533067 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
GIF-204ENST00000533067 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
GIF-204ENST00000533067 PROM2Q8N271 834 aa16.12■□□□□ 0.17
GIF-204ENST00000533067 MS4A3Q96HJ5 214 aa15.92■□□□□ 0.14
GIF-204ENST00000533067 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
GIF-204ENST00000533067 POTEB2H3BUK9 544 aa15.9■□□□□ 0.14
GIF-204ENST00000533067 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
GIF-204ENST00000533067 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
GIF-204ENST00000533067 ASTLQ6HA08 431 aaPredicted RBP15.85■□□□□ 0.13
GIF-204ENST00000533067 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms