RNA–Protein interactions for RNA: ENST00000532765.1

ATM-218, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-218ENST00000532765 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
ATM-218ENST00000532765 CHIC1Q5VXU3 224 aa15.34■□□□□ 0.05
ATM-218ENST00000532765 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
ATM-218ENST00000532765 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
ATM-218ENST00000532765 FOXD1Q16676 465 aa12.86□□□□□ -0.35
ATM-218ENST00000532765 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
ATM-218ENST00000532765 MSH5O43196 834 aa12.03□□□□□ -0.48
ATM-218ENST00000532765 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
ATM-218ENST00000532765 PIAS4Q8N2W9 510 aaPredicted RBP11.97□□□□□ -0.49
ATM-218ENST00000532765 ADRA2BP18089 450 aa11.96□□□□□ -0.49
ATM-218ENST00000532765 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
ATM-218ENST00000532765 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
ATM-218ENST00000532765 DMRT2Q9Y5R5 561 aa10.95□□□□□ -0.66
ATM-218ENST00000532765 SCAF1Q9H7N4 1312 aaKnown RBP10.94□□□□□ -0.66
ATM-218ENST00000532765 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.69
ATM-218ENST00000532765 HOXD11P31277 338 aaPredicted RBP10.55□□□□□ -0.72
ATM-218ENST00000532765 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.73
ATM-218ENST00000532765 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
ATM-218ENST00000532765 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
ATM-218ENST00000532765 KCNA4P22459 653 aa10.37□□□□□ -0.75
ATM-218ENST00000532765 CACNB1Q02641 598 aaPredicted RBP10.31□□□□□ -0.76
ATM-218ENST00000532765 RNF39Q9H2S5 420 aa10.29□□□□□ -0.76
ATM-218ENST00000532765 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
ATM-218ENST00000532765 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
ATM-218ENST00000532765 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
ATM-218ENST00000532765 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
ATM-218ENST00000532765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.98□□□□□ -0.813e-7■□□□□ 9.5
ATM-218ENST00000532765 SLC4A1APQ9BWU0 796 aaKnown RBP9.91□□□□□ -0.82
ATM-218ENST00000532765 EHMT2Q96KQ7 1210 aa9.89□□□□□ -0.83
ATM-218ENST00000532765 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
ATM-218ENST00000532765 SLC4A2P04920 1241 aa9.72□□□□□ -0.85
ATM-218ENST00000532765 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
ATM-218ENST00000532765 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
ATM-218ENST00000532765 DSG3P32926 999 aa9.62□□□□□ -0.87
ATM-218ENST00000532765 CAPN15O75808 1086 aa9.6□□□□□ -0.87
ATM-218ENST00000532765 ZBTB22O15209 634 aa9.55□□□□□ -0.88
ATM-218ENST00000532765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
ATM-218ENST00000532765 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
ATM-218ENST00000532765 APLP2Q06481 763 aa9.5□□□□□ -0.89
ATM-218ENST00000532765 FOXD4L1Q9NU39 408 aa9.47□□□□□ -0.89
ATM-218ENST00000532765 SAMD1Q6SPF0 538 aaPredicted RBP9.46□□□□□ -0.9
ATM-218ENST00000532765 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
ATM-218ENST00000532765 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
ATM-218ENST00000532765 ABCB7O75027 752 aa9.37□□□□□ -0.91
ATM-218ENST00000532765 MYCNP04198 464 aaPredicted RBP9.37□□□□□ -0.91
ATM-218ENST00000532765 POLA2Q14181 598 aa9.23□□□□□ -0.93
ATM-218ENST00000532765 POTEHQ6S545 545 aa9.23□□□□□ -0.93
ATM-218ENST00000532765 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
ATM-218ENST00000532765 RBM42Q9BTD8 480 aaKnown RBP9.16□□□□□ -0.94
ATM-218ENST00000532765 ATXN8OSP0DMR3 200 aa9.11□□□□□ -0.95
ATM-218ENST00000532765 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
ATM-218ENST00000532765 CHRDL2Q6WN34 429 aa8.97□□□□□ -0.97
ATM-218ENST00000532765 AKT1S1Q96B36 256 aa8.96□□□□□ -0.98
ATM-218ENST00000532765 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
ATM-218ENST00000532765 REM2Q8IYK8 340 aaPredicted RBP8.87□□□□□ -0.99
ATM-218ENST00000532765 FBLN2P98095 1184 aa8.78□□□□□ -1
ATM-218ENST00000532765 SPDYE2BA6NHP3 402 aa8.77□□□□□ -1.01
ATM-218ENST00000532765 SPDYE6P0CI01 402 aa8.77□□□□□ -1.01
ATM-218ENST00000532765 SPDYE2Q495Y8 402 aa8.77□□□□□ -1.01
ATM-218ENST00000532765 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
ATM-218ENST00000532765 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
ATM-218ENST00000532765 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
ATM-218ENST00000532765 FXR2P51116 673 aaKnown RBP eCLIP8.72□□□□□ -1.011e-7■■□□□ 12.6
ATM-218ENST00000532765 FKBP8Q14318 412 aa8.72□□□□□ -1.01
ATM-218ENST00000532765 SSUH2Q9Y2M2 353 aa8.66□□□□□ -1.02
ATM-218ENST00000532765 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
ATM-218ENST00000532765 ZNF692Q9BU19 519 aaPredicted RBP8.64□□□□□ -1.03
ATM-218ENST00000532765 SPDYE1Q8NFV5 336 aaPredicted RBP8.61□□□□□ -1.03
ATM-218ENST00000532765 AMER1Q5JTC6 1135 aaPredicted RBP8.6□□□□□ -1.03
ATM-218ENST00000532765 HAX1O00165 279 aa8.58□□□□□ -1.04
ATM-218ENST00000532765 RTN4Q9NQC3 1192 aaKnown RBP8.56□□□□□ -1.04
ATM-218ENST00000532765 CLEC11AQ9Y240 323 aa8.55□□□□□ -1.04
ATM-218ENST00000532765 PRKAR2AP13861 404 aaKnown RBP8.52□□□□□ -1.05
ATM-218ENST00000532765 EVX2Q03828 476 aa8.52□□□□□ -1.05
ATM-218ENST00000532765 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
ATM-218ENST00000532765 PABPN1Q86U42 306 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATM-218ENST00000532765 SLC24A1O60721 1099 aa8.45□□□□□ -1.06
ATM-218ENST00000532765 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
ATM-218ENST00000532765 PRR29P0C7W0 189 aa8.43□□□□□ -1.06
ATM-218ENST00000532765 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
ATM-218ENST00000532765 PROM2Q8N271 834 aa8.39□□□□□ -1.07
ATM-218ENST00000532765 FBXO3Q9UK99 471 aa8.34□□□□□ -1.07
ATM-218ENST00000532765 FARP1Q9Y4F1 1045 aaPredicted RBP8.32□□□□□ -1.08
ATM-218ENST00000532765 GABBR2O75899 941 aa8.31□□□□□ -1.08
ATM-218ENST00000532765 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
ATM-218ENST00000532765 CD44P16070 742 aaKnown RBP8.24□□□□□ -1.09
ATM-218ENST00000532765 CREBZFQ9NS37 354 aa8.24□□□□□ -1.09
ATM-218ENST00000532765 VASPP50552 380 aaPredicted RBP8.23□□□□□ -1.09
ATM-218ENST00000532765 CLCN6P51797 869 aa8.2□□□□□ -1.1
ATM-218ENST00000532765 POTEIP0CG38 1075 aa8.15□□□□□ -1.1
ATM-218ENST00000532765 ZNF579Q8NAF0 562 aaKnown RBP8.15□□□□□ -1.1
ATM-218ENST00000532765 MNX1P50219 401 aaPredicted RBP8.14□□□□□ -1.11
ATM-218ENST00000532765 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
ATM-218ENST00000532765 ZRANB1Q9UGI0 708 aa8.12□□□□□ -1.11
ATM-218ENST00000532765 LHX8Q68G74 356 aa8.1□□□□□ -1.11
ATM-218ENST00000532765 NPM1P06748 294 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATM-218ENST00000532765 PLCD3Q8N3E9 789 aa8.06□□□□□ -1.12
ATM-218ENST00000532765 MIER1Q8N108 512 aa8.04□□□□□ -1.12
ATM-218ENST00000532765 KLHL34Q8N239 644 aa8.04□□□□□ -1.12
ATM-218ENST00000532765 DCBLD2Q96PD2 775 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms