RNA–Protein interactions for RNA: ENST00000532418.1

MS4A1-208, Transcript of membrane spanning 4-domains A1, humanhuman

TSL 2

Gene MS4A1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1-208ENST00000532418 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
MS4A1-208ENST00000532418 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
MS4A1-208ENST00000532418 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
MS4A1-208ENST00000532418 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
MS4A1-208ENST00000532418 FOXD1Q16676 465 aa22.75■■□□□ 1.23
MS4A1-208ENST00000532418 MSH5O43196 834 aa21.45■■□□□ 1.02
MS4A1-208ENST00000532418 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
MS4A1-208ENST00000532418 POTEDQ86YR6 584 aa21.28■■□□□ 1
MS4A1-208ENST00000532418 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
MS4A1-208ENST00000532418 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
MS4A1-208ENST00000532418 ADRA2BP18089 450 aa20.99■□□□□ 0.95
MS4A1-208ENST00000532418 MAPK8IP2Q13387 824 aaPredicted RBP19.34■□□□□ 0.69
MS4A1-208ENST00000532418 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
MS4A1-208ENST00000532418 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
MS4A1-208ENST00000532418 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
MS4A1-208ENST00000532418 HOXD11P31277 338 aaPredicted RBP18.53■□□□□ 0.56
MS4A1-208ENST00000532418 CACNB1Q02641 598 aaPredicted RBP18.53■□□□□ 0.56
MS4A1-208ENST00000532418 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
MS4A1-208ENST00000532418 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
MS4A1-208ENST00000532418 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
MS4A1-208ENST00000532418 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
MS4A1-208ENST00000532418 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
MS4A1-208ENST00000532418 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
MS4A1-208ENST00000532418 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
MS4A1-208ENST00000532418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
MS4A1-208ENST00000532418 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
MS4A1-208ENST00000532418 KCNA4P22459 653 aa17.58■□□□□ 0.4
MS4A1-208ENST00000532418 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
MS4A1-208ENST00000532418 CAPN15O75808 1086 aa17.04■□□□□ 0.32
MS4A1-208ENST00000532418 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
MS4A1-208ENST00000532418 DSG3P32926 999 aa17■□□□□ 0.31
MS4A1-208ENST00000532418 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
MS4A1-208ENST00000532418 APLP2Q06481 763 aa16.83■□□□□ 0.28
MS4A1-208ENST00000532418 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
MS4A1-208ENST00000532418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
MS4A1-208ENST00000532418 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
MS4A1-208ENST00000532418 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
MS4A1-208ENST00000532418 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
MS4A1-208ENST00000532418 POTEHQ6S545 545 aa16.65■□□□□ 0.26
MS4A1-208ENST00000532418 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
MS4A1-208ENST00000532418 ABCB7O75027 752 aa16.59■□□□□ 0.25
MS4A1-208ENST00000532418 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
MS4A1-208ENST00000532418 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
MS4A1-208ENST00000532418 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
MS4A1-208ENST00000532418 POLA2Q14181 598 aa16.21■□□□□ 0.19
MS4A1-208ENST00000532418 ZBTB22O15209 634 aa16.09■□□□□ 0.17
MS4A1-208ENST00000532418 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
MS4A1-208ENST00000532418 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
MS4A1-208ENST00000532418 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
MS4A1-208ENST00000532418 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
MS4A1-208ENST00000532418 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
MS4A1-208ENST00000532418 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
MS4A1-208ENST00000532418 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
MS4A1-208ENST00000532418 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
MS4A1-208ENST00000532418 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
MS4A1-208ENST00000532418 PIP4P2Q8N4L2 257 aa15.54■□□□□ 0.08
MS4A1-208ENST00000532418 SP7Q8TDD2 431 aaPredicted RBP15.5■□□□□ 0.07
MS4A1-208ENST00000532418 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
MS4A1-208ENST00000532418 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
MS4A1-208ENST00000532418 FBLN2P98095 1184 aa15.42■□□□□ 0.06
MS4A1-208ENST00000532418 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
MS4A1-208ENST00000532418 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
MS4A1-208ENST00000532418 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
MS4A1-208ENST00000532418 HAX1O00165 279 aa15.33■□□□□ 0.04
MS4A1-208ENST00000532418 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
MS4A1-208ENST00000532418 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
MS4A1-208ENST00000532418 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
MS4A1-208ENST00000532418 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
MS4A1-208ENST00000532418 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
MS4A1-208ENST00000532418 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
MS4A1-208ENST00000532418 EVX2Q03828 476 aa15.06■□□□□ 0
MS4A1-208ENST00000532418 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
MS4A1-208ENST00000532418 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
MS4A1-208ENST00000532418 PRR29P0C7W0 189 aa14.88□□□□□ -0.03
MS4A1-208ENST00000532418 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
MS4A1-208ENST00000532418 GABBR2O75899 941 aa14.76□□□□□ -0.05
MS4A1-208ENST00000532418 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
MS4A1-208ENST00000532418 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
MS4A1-208ENST00000532418 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
MS4A1-208ENST00000532418 CLCN6P51797 869 aa14.55□□□□□ -0.08
MS4A1-208ENST00000532418 LHX8Q68G74 356 aa14.53□□□□□ -0.08
MS4A1-208ENST00000532418 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
MS4A1-208ENST00000532418 FKBP8Q14318 412 aa14.42□□□□□ -0.1
MS4A1-208ENST00000532418 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
MS4A1-208ENST00000532418 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
MS4A1-208ENST00000532418 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
MS4A1-208ENST00000532418 PROM2Q8N271 834 aa14.36□□□□□ -0.11
MS4A1-208ENST00000532418 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
MS4A1-208ENST00000532418 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
MS4A1-208ENST00000532418 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
MS4A1-208ENST00000532418 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
MS4A1-208ENST00000532418 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
MS4A1-208ENST00000532418 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
MS4A1-208ENST00000532418 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
MS4A1-208ENST00000532418 PHF12Q96QT6 1004 aa14.11□□□□□ -0.15
MS4A1-208ENST00000532418 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
MS4A1-208ENST00000532418 MIER1Q8N108 512 aa13.98□□□□□ -0.17
MS4A1-208ENST00000532418 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
MS4A1-208ENST00000532418 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
MS4A1-208ENST00000532418 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms